myRT

myRT report for GCA_000338755.1_ASM33875v1

Download annotations/find similar RTs

Seq: CP004072.1 Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pAW63, complete sequence (71777 bp)
Overview 1 RT 1: 2582-9935 bp Neighborhood of RT #1 [2582, 9935] DUF5513 RVT-GII HNHc VirB4_CagE Feature: gene Location: 2582-2857 bp Ori: AGE81655.1 Feature: domain Description: DUF5513 Location: 2585-2855 bp Feature: domain Description: DUF551 3 Location: 2585-2855 bp Feature: gene Location: 2946-3554 bp Feature: gene Location: 4449-6254 bp Ori: AGE81657.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4743-5439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4743-5439 bp Feature: domain Description: HNHc Note: nucleases Location: 6000-6138 bp Feature: domain Description: HNHc Note: nucleases Location: 6000-61 38 bp Feature: gene Location: 7316-9250 bp Ori: AGE81658.1 Feature: domain Description: VirB4_CagE Location: 7646-9161 bp Feature: domain Description: VirB4_CagE Location: 7646-91 61 bp Feature: gene Location: 9267-9935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5513 (pfam17632), RVT-GII, HNHc (smart00507), VirB4_CagE (TIGR00929)

Seq: CP004070.1 Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT73, complete sequence (77351 bp)
Overview 1 RT 1: 26281-29987 bp Neighborhood of RT #1 [26281, 29987] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 26281-27333 bp Ori: AGE81500.1 Feature: domain Description: DDE_Tnp_1 Location: 26635-27319 bp Feature: domain Description: DDE_Tnp_1 Location: 2 6635-2 7319 bp Feature: gene Location: 27542-27664 bp Feature: gene Location: 27838-29145 bp Ori: AGE81502.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28123-28762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 812 3-2 8762 bp Feature: domain Description: GIIM Note: maturase Location: 28837-29062 bp Feature: domain Description: GIIM Note: maturase Location: 2 8837-2 9062 bp Feature: gene Location: 29439-29672 bp Feature: gene Location: 29871-29987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: CP004069.1 Bacillus thuringiensis serovar kurstaki str. HD73, complete genome (5646799 bp)
Overview 1 RT 1: 206006-210560 bp 2 RT 2: 690320-695607 bp 3 RT 3: 793036-797195 bp 4 RT 4: 1084054-1088054 bp 5 RT 5: 2097973-2102519 bp 6 RT 6: 2163567-2167726 bp 7 RT 7: 2631382-2637675 bp 8 RT 8: 3269347-3275691 bp 9 RT 9: 3369689-3374463 bp 10 RT 10: 3614776-3619755 bp 11 RT 11: 3790765-3797172 bp 12 RT 12: 3991092-3999148 bp 13 RT 13: 5213548-5218702 bp 14 RT 14: 5483608-5489379 bp 15 RT 15: 5607832-5612803 bp Neighborhood of RT #1 [206006, 210565] DppB DDE_Tnp_1 RVT-GII GIIM DppB Neighborhood of RT #2 [690320, 695612] NupC DDE_Tnp_1 RVT-GII GIIM VOC_Bs_YwkD_like Neighborhood of RT #3 [793036, 797195] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #4 [1084054, 1088054] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #5 [2097973, 2102533] DDE_Tnp_1 RVT-GII GIIM CC3_like_SDR_a Neighborhood of RT #6 [2163567, 2167726] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #7 [2631382, 2637683] Lysozyme_like RVT-GII Intron_maturas2 HNHc RimL MgtE Neighborhood of RT #8 [3269347, 3275720] Uup Uup HATPase_BceS-YxdK-YvcQ-like RVT-GII HNHc OmpR Neighborhood of RT #9 [3369689, 3374495] DUF2187 RVT-GII GIIM DDE_Tnp_1 stp Neighborhood of RT #10 [3614776, 3619755] COG4584 RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #11 [3790765, 3797177] GltS_FMN OYE_like_FMN RVT-GII HNHc FadH CdnL Neighborhood of RT #12 [3991092, 3999156] PRK10416 SMC_prok_B RVT-GII HNHc SMC_prok_B rnc Neighborhood of RT #13 [5213548, 5218758] RVT-GII GIIM DDE_Tnp_1 CBM_4_9 CBM_4_9 Neighborhood of RT #14 [5483608, 5489423] cls RVT-GII GIIM DDE_Tnp_1 uvsE Neighborhood of RT #15 [5607832, 5612913] SrmB RRM_BsYxiN_like RVT-GII GIIM DDE_Tnp_1 SrmB Feature: gene Location: 206006-206683 bp Ori: AGE75789.1 Feature: domain Description: DppB Location: 206009-206591 bp Feature: domain Description: DppB Location: 206009-206591 bp Feature: gene Location: 206661-207719 bp Ori: AGE75790.1 Feature: domain Description: DDE_Tnp_1 Location: 207018-207705 bp Feature: domain Description: DDE_Tnp_1 Location: 207018-207705 bp Feature: gene Location: 208224-209531 bp Ori: AGE75791.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208509-209148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208509-209148 bp Feature: domain Description: GIIM Note: maturase Location: 209223-209448 bp Feature: domain Description: GIIM Note: maturase Location: 209223 -209448 bp Feature: gene Location: 209756-210067 bp Feature: gene Location: 210230-210565 bp Ori: AGE75793.1 Feature: domain Description: DppB Location: 210233-210560 bp Feature: domain Description: DppB Location: 21023 3 -210560 bp Feature: gene Location: 690320-691498 bp Ori: AGE76258.1 Feature: domain Description: NupC Location: 690323-691496 bp Feature: domain Description: NupC Location: 6903 23 -691496 bp Feature: gene Location: 691600-692658 bp Ori: AGE76259.1 Feature: domain Description: DDE_Tnp_1 Location: 691957-692644 bp Feature: domain Description: DDE_Tnp_1 Location: 691957-692644 bp Feature: gene Location: 693163-694470 bp Ori: AGE76260.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693448-694087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693 448-694087 bp Feature: domain Description: GIIM Note: maturase Location: 694162-694387 bp Feature: domain Description: GIIM Note: maturase Location: 694162-6943 87 bp Feature: gene Location: 694695-695006 bp Feature: gene Location: 695226-695612 bp Ori: AGE76262.1 Feature: domain Description: VOC_Bs_YwkD_like Location: 695241-695607 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 695241-695607 bp Feature: gene Location: 793036-793353 bp Feature: gene Location: 793518-794576 bp Ori: AGE76373.1 Feature: domain Description: DDE_Tnp_1 Location: 793875-794562 bp Feature: domain Description: DDE_Tnp_1 Location: 793 875-794562 bp Feature: gene Location: 795081-796388 bp Ori: AGE76374.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 795366-796005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7953 66-796005 bp Feature: domain Description: GIIM Note: maturase Location: 796080-796305 bp Feature: domain Description: GIIM Note: maturase Location: 796080-7963 05 bp Feature: gene Location: 796613-796924 bp Feature: gene Location: 797043-797195 bp Feature: gene Location: 1084054-1084515 bp Feature: gene Location: 1085009-1085365 bp Ori: AGE76673.1 Feature: domain Description: DDE_Tnp_1 Location: 1085165-1085351 bp Feature: domain Description: DDE_Tnp_1 Location: 1085165-10853 51 bp Feature: gene Location: 1085870-1087177 bp Ori: AGE76674.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1086155-1086794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1086155-1086794 bp Feature: domain Description: GIIM Note: maturase Location: 1086869-1087094 bp Feature: domain Description: GIIM Note: maturase Location: 1086869-1087094 bp Feature: gene Location: 1087453-1087710 bp Feature: gene Location: 1087923-1088054 bp Feature: gene Location: 2097973-2098194 bp Feature: gene Location: 2098172-2099230 bp Ori: AGE77774.1 Feature: domain Description: DDE_Tnp_1 Location: 2098529-2099216 bp Feature: domain Description: DDE_Tnp_1 Location: 2098529-2099216 bp Feature: gene Location: 2099735-2101042 bp Ori: AGE77775.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2100020-2100659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2100020-2100659 bp Feature: domain Description: GIIM Note: maturase Location: 2100734-2100959 bp Feature: domain Description: GIIM Note: maturase Location: 210073 4-2100959 bp Feature: gene Location: 2101267-2101578 bp Feature: gene Location: 2101874-2102533 bp Ori: AGE77777.1 Feature: domain Description: CC3_like_SDR_a Location: 2101889-2102519 bp Feature: domain Description: CC3 _like_SDR_a Location: 2101889-2102519 bp Feature: gene Location: 2163567-2163884 bp Feature: gene Location: 2164049-2165107 bp Ori: AGE77865.1 Feature: domain Description: DDE_Tnp_1 Location: 2164406-2165093 bp Feature: domain Description: DDE_Tnp_1 Location: 2164406-2165093 bp Feature: gene Location: 2165612-2166919 bp Ori: AGE77866.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2165897-2166536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2165897-216653 6 bp Feature: domain Description: GIIM Note: maturase Location: 2166611-2166836 bp Feature: domain Description: GIIM Note: maturase Location: 2166611-216683 6 bp Feature: gene Location: 2167144-2167455 bp Feature: gene Location: 2167574-2167726 bp Feature: gene Location: 2631382-2631516 bp Feature: gene Location: 2631737-2632318 bp Ori: AGE78310.1 Feature: domain Description: Lysozyme_like Location: 2631872-2632307 bp Feature: domain Description: Lysozyme_like Location: 263 1872-263 23 07 bp Feature: gene Location: 2632894-2634717 bp Ori: AGE78311.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2633158-2633992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263 3 158-263 3 992 bp Feature: domain Description: Intron_maturas2 Location: 2634061-2634400 bp Feature: domain Description: Intron_maturas2 Location: 263 4061-263 4400 bp Feature: domain Description: HNHc Note: nucleases Location: 2634538-2634694 bp Feature: domain Description: HNHc Note: nucleases Location: 263 453 8-263 4694 bp Feature: gene Location: 2635214-2635720 bp Ori: AGE78312.1 Feature: domain Description: RimL Location: 2635223-2635718 bp Feature: domain Description: RimL Location: 263 5223 -263 5718 bp Feature: gene Location: 2636355-2637683 bp Ori: AGE78313.1 Feature: domain Description: MgtE Location: 2636370-2637675 bp Feature: domain Description: MgtE Location: 263 63 70-263 7675 bp Feature: gene Location: 3269347-3270993 bp Ori: AGE78982.1 Feature: domain Description: Uup Location: 3269374-3269605 bp Feature: domain Description: Uup Location: 3 2693 74-3 269605 bp Feature: domain Description: Uup Location: 3269620-3270829 bp Feature: domain Description: Uup Location: 3 269620-3 270829 bp Feature: gene Location: 3271427-3272092 bp Ori: AGE78983.1 Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 3271757-3272081 bp Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 3 271757-3 272081 bp Feature: gene Location: 3272286-3274091 bp Ori: AGE78984.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3272580-3273276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 272580-3 273 276 bp Feature: domain Description: HNHc Note: nucleases Location: 3273837-3273975 bp Feature: domain Description: HNHc Note: nucleases Location: 3 273 83 7-3 273 975 bp Feature: gene Location: 3274765-3274893 bp Feature: gene Location: 3275013-3275720 bp Ori: AGE78986.1 Feature: domain Description: OmpR Location: 3275022-3275691 bp Feature: domain Description: OmpR Location: 3 275022-3 275691 bp Feature: gene Location: 3369689-3369913 bp Ori: AGE79084.1 Feature: domain Description: DUF2187 Location: 3369713-3369875 bp Feature: domain Description: DUF2187 Location: 3 3 69713 -3 3 69875 bp Feature: gene Location: 3370173-3370484 bp Feature: gene Location: 3370709-3372016 bp Ori: AGE79086.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3370994-3371633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 70994-3 3 7163 3 bp Feature: domain Description: GIIM Note: maturase Location: 3371708-3371933 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 71708-3 3 7193 3 bp Feature: gene Location: 3372521-3373579 bp Ori: AGE79087.1 Feature: domain Description: DDE_Tnp_1 Location: 3372878-3373565 bp Feature: domain Description: DDE_Tnp_1 Location: 3 3 72878-3 3 73 565 bp Feature: gene Location: 3373842-3374495 bp Ori: AGE79088.1 Feature: domain Description: stp Location: 3373851-3374463 bp Feature: domain Description: stp Location: 3 3 73 851-3 3 74463 bp Feature: gene Location: 3614776-3615771 bp Ori: AGE79346.1 Feature: domain Description: COG4584 Location: 3615238-3615628 bp Feature: domain Description: COG4584 Location: 3 61523 8-3 615628 bp Feature: gene Location: 3615882-3616193 bp Feature: gene Location: 3616418-3617725 bp Ori: AGE79348.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3616703-3617342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 616703 -3 6173 42 bp Feature: domain Description: GIIM Note: maturase Location: 3617417-3617642 bp Feature: domain Description: GIIM Note: maturase Location: 3 617417-3 617642 bp Feature: gene Location: 3618230-3619288 bp Ori: AGE79349.1 Feature: domain Description: DDE_Tnp_1 Location: 3618587-3619274 bp Feature: domain Description: DDE_Tnp_1 Location: 3 618587-3 619274 bp Feature: gene Location: 3619381-3619755 bp Feature: gene Location: 3790765-3792339 bp Ori: AGE79508.1 Feature: domain Description: GltS_FMN Location: 3790912-3792274 bp Feature: domain Description: GltS_FMN Location: 3 790912-3 792274 bp Feature: gene Location: 3792407-3793366 bp Ori: AGE79509.1 Feature: domain Description: OYE_like_FMN Location: 3792458-3793337 bp Feature: domain Description: OYE_like_FMN Location: 3 792458-3 793 3 3 7 bp Feature: gene Location: 3793393-3795222 bp Ori: AGE79510.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3793687-3794383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 793 687-3 7943 83 bp Feature: domain Description: HNHc Note: nucleases Location: 3794944-3795082 bp Feature: domain Description: HNHc Note: nucleases Location: 3 794944-3 795082 bp Feature: gene Location: 3795885-3796139 bp Ori: AGE79511.1 Feature: domain Description: FadH Location: 3795972-3796104 bp Feature: domain Description: FadH Location: 3 795972-3 796104 bp Feature: gene Location: 3796701-3797177 bp Ori: AGE79512.1 Feature: domain Description: CdnL Location: 3796719-3797172 bp Feature: domain Description: CdnL Location: 3 796719-3 797172 bp Feature: gene Location: 3991092-3992081 bp Ori: AGE79708.1 Feature: domain Description: PRK10416 Location: 3991116-3992058 bp Feature: domain Description: PRK10416 Location: 3 991116-3 992058 bp Feature: gene Location: 3992097-3994958 bp Ori: AGE79709.1 Feature: domain Description: SMC_prok_B Location: 3992103-3994926 bp Feature: domain Description: SMC_prok_B Location: 3 992103 -3 994926 bp Feature: gene Location: 3995302-3997107 bp Ori: AGE79710.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3995596-3996292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 995596-3 996292 bp Feature: domain Description: HNHc Note: nucleases Location: 3996853-3996991 bp Feature: domain Description: HNHc Note: nucleases Location: 3 996853 -3 996991 bp Feature: gene Location: 3997781-3998272 bp Ori: AGE79711.1 Feature: domain Description: SMC_prok_B Location: 3997787-3998255 bp Feature: domain Description: SMC_prok_B Location: 3 997787-3 998255 bp Feature: gene Location: 3998419-3999156 bp Ori: AGE79712.1 Feature: domain Description: rnc Location: 3998470-3999148 bp Feature: domain Description: rnc Location: 3 998470-3 999148 bp Feature: gene Location: 5213548-5213868 bp Feature: gene Location: 5214076-5214387 bp Feature: gene Location: 5214612-5215919 bp Ori: AGE81034.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5214897-5215536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5214897-521553 6 bp Feature: domain Description: GIIM Note: maturase Location: 5215611-5215836 bp Feature: domain Description: GIIM Note: maturase Location: 5215611-521583 6 bp Feature: gene Location: 5216424-5217482 bp Ori: AGE81035.1 Feature: domain Description: DDE_Tnp_1 Location: 5216781-5217468 bp Feature: domain Description: DDE_Tnp_1 Location: 5216781-5217468 bp Feature: gene Location: 5217826-5218758 bp Ori: AGE81036.1 Feature: domain Description: CBM_4_9 Location: 5217928-5218270 bp Feature: domain Description: CBM_4_9 Location: 5217928-5218270 bp Feature: domain Description: CBM_4_9 Location: 5218345-5218702 bp Feature: domain Description: CBM_4_9 Location: 52183 45-5218702 bp Feature: gene Location: 5483608-5484801 bp Ori: AGE81330.1 Feature: domain Description: cls Location: 5483695-5484775 bp Feature: domain Description: cls Location: 5483 695-5484775 bp Feature: gene Location: 5485231-5485542 bp Feature: gene Location: 5485767-5487074 bp Ori: AGE81332.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5486052-5486691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5486052-5486691 bp Feature: domain Description: GIIM Note: maturase Location: 5486766-5486991 bp Feature: domain Description: GIIM Note: maturase Location: 5486766-5486991 bp Feature: gene Location: 5487579-5488637 bp Ori: AGE81333.1 Feature: domain Description: DDE_Tnp_1 Location: 5487936-5488623 bp Feature: domain Description: DDE_Tnp_1 Location: 548793 6-5488623 bp Feature: gene Location: 5488863-5489423 bp Ori: AGE81334.1 Feature: domain Description: uvsE Location: 5488866-5489379 bp Feature: domain Description: uvsE Location: 5488866-54893 79 bp Feature: gene Location: 5607832-5608881 bp Ori: AGE81443.1 Feature: domain Description: SrmB Location: 5607835-5608648 bp Feature: domain Description: SrmB Location: 560783 5-5608648 bp Feature: domain Description: RRM_BsYxiN_like Location: 5608657-5608870 bp Feature: domain Description: RRM_BsYxiN_like Location: 5608657-5608870 bp Feature: gene Location: 5609101-5609412 bp Feature: gene Location: 5609637-5610944 bp Ori: AGE81445.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5609922-5610561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5609922-5610561 bp Feature: domain Description: GIIM Note: maturase Location: 5610636-5610861 bp Feature: domain Description: GIIM Note: maturase Location: 561063 6-5610861 bp Feature: gene Location: 5611449-5612507 bp Ori: AGE81446.1 Feature: domain Description: DDE_Tnp_1 Location: 5611806-5612493 bp Feature: domain Description: DDE_Tnp_1 Location: 5611806-5612493 bp Feature: gene Location: 5612485-5612913 bp Ori: AGE81447.1 Feature: domain Description: SrmB Location: 5612491-5612803 bp Feature: domain Description: SrmB Location: 5612491-5612803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppB (COG0601), DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), NupC (COG1972), VOC_Bs_YwkD_like (cd08352), CC3_like_SDR_a (cd05250), Lysozyme_like (pfam13702), Intron_maturas2 (pfam01348), HNHc (smart00507)
RimL (COG1670), MgtE (pfam01769), Uup (COG0488), HATPase_BceS-YxdK-YvcQ-like (cd16948), OmpR (COG0745), DUF2187 (pfam09953), stp (TIGR00814), COG4584 (Transposase ), GltS_FMN (cd02808), OYE_like_FMN (cd02933)
FadH (COG1902), CdnL (COG1329), PRK10416 (signal recognition particle-docking protein FtsY; Provisional), SMC_prok_B (TIGR02168), rnc (PRK00102), CBM_4_9 (pfam02018), cls, uvsE (PRK02308), SrmB (COG0513), RRM_BsYxiN_like (cd12500)