myRT

myRT report for GCA_000339015.1_ASM33901v1

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Seq: CP004091.1 Cronobacter sakazakii SP291, complete genome (4344092 bp)
Overview 1 RT 1: 620332-625216 bp 2 RT 2: 1303384-1307839 bp Neighborhood of RT #1 [620332, 625269] DUF932 RVT-Retrons Tra5 HTH_Tnp_1 Neighborhood of RT #2 [1303384, 1307841] DUF2251 RVT-UG2 PRK10276 umuC Feature: gene Location: 620332-621150 bp Ori: AGE85211.1 Feature: domain Description: DUF932 Location: 620440-621115 bp Feature: domain Description: DUF932 Location: 620440-621 1 1 5 bp Feature: gene Location: 622986-623261 bp Feature: gene Location: 623334-624089 bp Ori: AGE85213.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 623340-623823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 623340-623823 bp Feature: gene Location: 624149-624982 bp Ori: AGE85214.1 Feature: domain Description: Tra5 Location: 624176-624938 bp Feature: domain Description: Tra5 Location: 6241 76-624938 bp Feature: gene Location: 625006-625269 bp Ori: AGE85215.1 Feature: domain Description: HTH_Tnp_1 Location: 625012-625216 bp Feature: domain Description: HTH_Tnp_1 Location: 62501 2-62521 6 bp Feature: gene Location: 1303384-1303788 bp Ori: AGE85839.1 Feature: domain Description: DUF2251 Location: 1303456-1303717 bp Feature: domain Description: DUF2251 Location: 1 303456-1 30371 7 bp Feature: gene Location: 1304000-1304053 bp Feature: gene Location: 1304355-1305641 bp Ori: AGE85841.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1304556-1305348 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 304556-1 305348 bp Feature: gene Location: 1306458-1306757 bp Ori: AGE85842.1 Feature: domain Description: PRK10276 Location: 1306461-1306647 bp Feature: domain Description: PRK1 0276 Location: 1 306461 -1 306647 bp Feature: gene Location: 1306660-1307841 bp Ori: AGE85843.1 Feature: domain Description: umuC Location: 1306663-1307839 bp Feature: domain Description: umuC Location: 1 306663-1 307839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-Retrons, Tra5 (COG2801), HTH_Tnp_1 (pfam01527), DUF2251 (pfam10008), RVT-UG2, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)