myRT

myRT report for GCA_000341395.1_ASM34139v1

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Seq: CP003985.1 Desulfocapsa sulfexigens DSM 10523, complete genome (3986761 bp)
Overview 1 RT 1: 2494067-2498650 bp 2 RT 2: 3030676-3036494 bp 3 RT 3: 3040665-3043972 bp Neighborhood of RT #1 [2494067, 2498868] DUF772 DDE_Tnp_1_6 RVT-GII GIIM HicB Neighborhood of RT #2 [3030676, 3036494] TolC RVT-Retrons Neighborhood of RT #3 [3040665, 3043972] PRK10209 RVT-GII GIIM Feature: gene Location: 2494067-2495620 bp Ori: AGF78772.1 Feature: domain Description: DUF772 Location: 2494232-2494436 bp Feature: domain Description: DUF772 Location: 2494232-2494436 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2495201-2495594 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 2495201 -2495594 bp Feature: gene Location: 2495792-2496331 bp Feature: gene Location: 2496345-2497694 bp Ori: AGF78774.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2496630-2497245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2496630-2497245 bp Feature: domain Description: GIIM Note: maturase Location: 2497293-2497491 bp Feature: domain Description: GIIM Note: maturase Location: 2497293-2497491 bp Feature: gene Location: 2497878-2498318 bp Feature: gene Location: 2498347-2498868 bp Ori: AGF78776.1 Feature: domain Description: HicB Location: 2498512-2498650 bp Feature: domain Description: HicB Location: 249851 2-2498650 bp Feature: gene Location: 3030676-3032094 bp Ori: AGF79252.1 Feature: domain Description: TolC Location: 3030781-3032077 bp Feature: domain Description: TolC Location: 3030781 -3032077 bp Feature: gene Location: 3032601-3033506 bp Feature: gene Location: 3034022-3034798 bp Ori: AGF79254.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3034025-3034556 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3034025-3034556 bp Feature: gene Location: 3035313-3035639 bp Feature: gene Location: 3035646-3036494 bp Feature: gene Location: 3040665-3041033 bp Ori: AGF79261.1 Feature: domain Description: PRK10209 Location: 3040767-3041016 bp Feature: domain Description: PRK1 0209 Location: 3040767-3041 01 6 bp Feature: gene Location: 3041092-3041742 bp Feature: gene Location: 3041756-3043105 bp Ori: AGF79263.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3042041-3042656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3042041 -3042656 bp Feature: domain Description: GIIM Note: maturase Location: 3042704-3042902 bp Feature: domain Description: GIIM Note: maturase Location: 3042704-3042902 bp Feature: gene Location: 3043194-3043376 bp Feature: gene Location: 3043373-3043972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388), HicB (pfam05534), TolC (COG1538), RVT-Retrons, PRK10209 (HdeD family acid-resistance protein)