myRT report for GCA_000344475.3_ASM34447v3
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Seq: CP032631.1 Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 chromosome, complete genome (6674594 bp)
Associated domains:myRT
| LZ_Tnp_IS66 (pfam13007) | , zf-IS66 (pfam13005) | , DDE_Tnp_IS66 (pfam03050) | , DDE_Tnp_IS66_C (pfam13817) | , TnpB_IS66 (pfam05717) | , RVT-GII | , GIIM (pfam08388) | , COG4584 (Transposase ) | , PAAR_motif (pfam05488) | , PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional) |
RVT-UG9, HTH_28 (pfam13518) | , DDE_3 (pfam13358) | , Chi1 (COG3469) | , FN3 (smart00060) | , ChiA1_BD (cd12214) | , COG3666 (Transposase ) | , DDE_Tnp_1_6 (pfam13751) | , RVT-Retrons | , ComA-like_MBL-fold (cd07731) |
trans_reg_C (cd00383), ArfA (COG3036) | , holA (TIGR01128) | , PRK10756 (protein CreA) | , PagL (pfam09411) | , DDE_Tnp_1 (pfam01609) | , YkgJ (COG0727) | , PRK05693 (SDR family oxidoreductase) | , CvfB (COG2996) | , PRK04914 (RNA polymerase-associated protein RapA) |
PRK06814 (acyl---phospholipid O-acyltransferase), DUF1534 (pfam07551) | , FhuE (COG4773) | , PRK10378 (inactive ferrous ion transporter periplasmic protein EfeO; Provisional) | , tat_substr_1 (TIGR01412) | , solA (PRK11259) | , GT_2_like_f (cd04182) | , RutF (TIGR03615) | , PRK13968 (putative succinate semialdehyde dehydrogenase; Provisional) | , PRK15441 (peptidyl-prolyl cis-trans isomerase C; Provisional) |
NERD (pfam08378), DEXXQc_Upf1-like (cd17934) | , Tas (COG0667) | , HisM (COG0765) | , PBP2_Mlr3796_like (cd13695) | , Hemerythrin (TIGR00058) | , COG3749 (Uncharacterized conserved protein, DUF934 family ) | , bac_FRK (cd01167) | , PGM_like3 (cd05801) | , FadM (COG0824) |
INT_C_like_1 (cd01184), TAT_signal (pfam10518) | , bact_SO_family_Moco (cd02108) | , YdhU (COG4117) | , InsE (COG2963) | , PBP1_rhizopine_binding_like | , CHASE3 (pfam05227) | , Tar (COG0840) | , ALDH_CddD_SSP0762 (cd07138) | , OprD (pfam03573) |
PRK11551 (putative 3-hydroxyphenylpropionic transporter MhpT; Provisional), modC_ABC (TIGR02142) | , Top1 (COG3569) | , Intron_maturas2 (pfam01348) | , HNHc (smart00507) | , DUF2625 (pfam10946) | , TauA (COG4521) | , ligand_gated_channel (cd01347) | , ExbD (pfam02472) | , PQQ_membr_DH (TIGR03074) |
decarb_PcaC (TIGR02425), PRK09053 (3-carboxy-cis,cis-muconate cycloisomerase; Provisional) | , HTH_Tnp_1 (pfam01527) | , PRK00153 (YbaB/EbfC family nucleoid-associated protein) | , Tsx (COG3248) | , lipid_A_lpxH (TIGR01854) | , DUF4123 (pfam13503) | , FliK (COG3144) | , Hpt (pfam01627) | , MFS_spinster_like (cd17328) |
AtoC (COG2204), TrHb1_N (cd00454) | , urea_degr_1 (TIGR03424) | , urea_carbox (TIGR02712) | , PRK08186 (allophanate hydrolase; Provisional) | , RfbB (COG1088) | , pgi (PRK14097) | , COG3662 (Uncharacterized conserved protein, DUF2236 family ) | , PRK05656 (acetyl-CoA C-acetyltransferase) | , CbiG (COG2073) |
CobJ (COG1010), Bfr (COG2193) | , PRK13981 (NAD synthetase; Provisional) | , nadE (TIGR00552) | , COG3241 (Azurin ) | , YebA (COG1305) | , PRK10590 (ATP-dependent RNA helicase RhlE; Provisional) | , pro_imino_pep_1 (TIGR01249) | , GT35_Glycogen_Phosphorylase (cd04300) | , COG5373 (Uncharacterized membrane protein ) |
DUF3999 (pfam13163), Arabinose_bd (pfam12625) | , AraC (COG2207) | , PRK05714 (2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional) | , PRK05732 (2-octaprenyl-6-methoxyphenyl hydroxylase; Validated) | , SerB (COG0560) | , DUF2269 (pfam10027) | , RlmJ (COG2961) | , GabT (COG0160) | , GDH_like_2 (cd12164) |
PLN02278 (succinic semialdehyde dehydrogenase), PRK07522 (acetylornithine deacetylase; Provisional) | , GAF (smart00065) | , PAS (smart00091) | , PRK10060 (cyclic di-GMP phosphodiesterase) | , PRK00058 (peptide-methionine (S)-S-oxide reductase MsrA) | , PRK12483 (threonine dehydratase; Reviewed) | , PRK00702 (ribose-5-phosphate isomerase RpiA) |
