myRT

myRT report for GCA_000349765.2_ASM34976v2

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Seq: CP004752.2 Mannheimia haemolytica USDA-ARS-USMARC-183 chromosome, complete genome (2657957 bp)
Overview 1 RT 1: 238410-247364 bp 2 RT 2: 1213462-1219232 bp Neighborhood of RT #1 [238410, 247399] PRK00566 RVT-UG2 PRK00062 ECA_wecA Neighborhood of RT #2 [1213462, 1219232] rplM rpsI RVT_N RVT-GII YaaA Feature: gene Location: 238410-238601 bp Feature: gene Location: 238673-242956 bp Ori: AGI31517.1 Gene: rpoC Feature: domain Description: PRK00566 Location: 238709-242798 bp Feature: domain Description: PRK00566 Location: 238709-242798 bp Feature: gene Location: 243351-244661 bp Ori: AGI31518.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 243546-244365 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 243546-244365 bp Feature: gene Location: 244913-246193 bp Ori: AGI31519.1 Gene: hemL Feature: domain Description: PRK00062 Location: 244919-246188 bp Feature: domain Description: PRK00062 Location: 24491 9-2461 88 bp Feature: gene Location: 246335-247399 bp Ori: AGI31520.1 Feature: domain Description: ECA_wecA Location: 246347-247364 bp Feature: domain Description: ECA_wecA Location: 246347-247364 bp Feature: gene Location: 1213462-1213890 bp Ori: AGI32505.1 Feature: domain Description: rplM Location: 1213465-1213888 bp Feature: domain Description: rplM Location: 1 21 3465-1 21 3888 bp Feature: gene Location: 1213907-1214302 bp Ori: AGI32504.1 Feature: domain Description: rpsI Location: 1213919-1214300 bp Feature: domain Description: rpsI Location: 1 21 391 9-1 21 4300 bp Feature: gene Location: 1215942-1217704 bp Gene: ltrA Feature: domain Description: RVT_N Location: 1216053-1216296 bp Feature: domain Description: RVT_N Location: 1 21 6053-1 21 6296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1216341-1217001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 6341 -1 21 7001 bp Feature: gene Location: 1217893-1218669 bp Ori: AGI32499.1 Feature: domain Description: YaaA Location: 1217896-1218664 bp Feature: domain Description: YaaA Location: 1 21 7896-1 21 8664 bp Feature: gene Location: 1218669-1219232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), ECA_wecA (TIGR02380), rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022)