myRT

myRT report for GCA_000349785.2_ASM34978v2

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Seq: CP004753.2 Mannheimia haemolytica USDA-ARS-USMARC-185 chromosome, complete genome (2544094 bp)
Overview 1 RT 1: 168491-177445 bp 2 RT 2: 1128930-1134768 bp Neighborhood of RT #1 [168491, 177480] PRK00566 RVT-UG2 PRK00062 ECA_wecA Neighborhood of RT #2 [1128930, 1134768] rplM rpsI RVT_N RVT-GII YaaA Feature: gene Location: 168491-168682 bp Feature: gene Location: 168754-173037 bp Ori: AGI36374.1 Gene: rpoC Feature: domain Description: PRK00566 Location: 168790-172879 bp Feature: domain Description: PRK00566 Location: 1 68790-1 72879 bp Feature: gene Location: 173432-174742 bp Ori: AGI36373.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 173627-174446 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 73627-1 74446 bp Feature: gene Location: 174994-176274 bp Ori: AGI36372.1 Gene: hemL Feature: domain Description: PRK00062 Location: 175000-176269 bp Feature: domain Description: PRK00062 Location: 1 75000-1 76269 bp Feature: gene Location: 176416-177480 bp Ori: AGI36371.1 Feature: domain Description: ECA_wecA Location: 176428-177445 bp Feature: domain Description: ECA_wecA Location: 1 76428-1 77445 bp Feature: gene Location: 1128930-1129358 bp Ori: AGI35414.1 Feature: domain Description: rplM Location: 1128933-1129356 bp Feature: domain Description: rplM Location: 1 1 28933-1 1 29356 bp Feature: gene Location: 1129375-1129770 bp Ori: AGI35413.1 Feature: domain Description: rpsI Location: 1129387-1129768 bp Feature: domain Description: rpsI Location: 1 1 29387-1 1 29768 bp Feature: gene Location: 1131478-1133240 bp Gene: ltrA Feature: domain Description: RVT_N Location: 1131589-1131832 bp Feature: domain Description: RVT_N Location: 1 1 31 589-1 1 31 832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1131877-1132537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 31 877-1 1 32537 bp Feature: gene Location: 1133429-1134205 bp Ori: AGI35408.1 Feature: domain Description: YaaA Location: 1133432-1134200 bp Feature: domain Description: YaaA Location: 1 1 33432-1 1 34200 bp Feature: gene Location: 1134205-1134768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), ECA_wecA (TIGR02380), rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022)