myRT

myRT report for GCA_000364385.3_ASM36438v3

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Seq: CP006663.1 Klebsiella pneumoniae strain ATCC BAA-2146 plasmid pCuAs, complete sequence (117755 bp)
Overview 1 RT 1: 113654-117704 bp Neighborhood of RT #1 [113654, 117704] umuC PRK10276 RVT-GII Feature: gene Location: 113654-114925 bp Ori: AHI39141.1 Gene: dinB_4 Feature: domain Description: umuC Location: 113657-114920 bp Feature: domain Description: umuC Location: 1 1 3657-1 1 4920 bp Feature: gene Location: 114925-115350 bp Ori: AHI39142.1 Gene: lexA_4 Feature: domain Description: PRK10276 Location: 114928-115336 bp Feature: domain Description: PRK1 0276 Location: 1 1 4928-1 1 5336 bp Feature: gene Location: 115753-117240 bp Ori: AHI39143.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116158-116848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 61 58-1 1 6848 bp Feature: gene Location: 117474-117704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CP006662.2 Klebsiella pneumoniae strain ATCC BAA-2146 plasmid pHg, complete sequence (85161 bp)
Overview 1 RT 1: 65426-71359 bp Neighborhood of RT #1 [65426, 71367] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 65426-65857 bp Feature: gene Location: 66337-67302 bp Ori: AHI39011.1 Gene: traC_3 Feature: domain Description: ArdC Location: 66463-67297 bp Feature: domain Description: ArdC Location: 66463-672 97 bp Feature: gene Location: 67772-69259 bp Ori: AHI39012.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68177-68867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68177-68867 bp Feature: gene Location: 69665-70096 bp Ori: AHI39013.1 Gene: lexA_5 Feature: domain Description: PRK10276 Location: 69716-70079 bp Feature: domain Description: PRK102 76 Location: 69716-70079 bp Feature: gene Location: 70096-71367 bp Ori: AHI39014.1 Gene: dinB_5 Feature: domain Description: umuC Location: 70099-71359 bp Feature: domain Description: umuC Location: 70099-71359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP006659.2 Klebsiella pneumoniae strain ATCC BAA-2146 chromosome 1, complete sequence (5435746 bp)
Overview 1 RT 1: 1342276-1345683 bp 2 RT 2: 1784929-1790534 bp 3 RT 3: 2156319-2161737 bp 4 RT 4: 2301896-2307761 bp 5 RT 5: 2384210-2387912 bp 6 RT 6: 3994679-3998250 bp Neighborhood of RT #1 [1342276, 1345784] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1784929, 1790560] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [2156319, 2161739] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2301896, 2307763] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2384210, 2387917] Laminin_G_3 RVT-GII PRK10597 Neighborhood of RT #6 [3994679, 3998250] Terminase_2 PRK10276 RVT-GII Feature: gene Location: 1342276-1343007 bp Ori: AHI34768.2 Feature: domain Description: Laminin_G_3 Location: 1342597-1342951 bp Feature: domain Description: Laminin_G_3 Location: 13 42597-13 42951 bp Feature: gene Location: 1343004-1343213 bp Feature: gene Location: 1343663-1345150 bp Ori: AHI34770.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1344068-1344758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 44068-13 44758 bp Feature: gene Location: 1345228-1345467 bp Feature: gene Location: 1345467-1345784 bp Ori: ALV39610.1 Feature: domain Description: PRK10276 Location: 1345473-1345587 bp Feature: domain Description: PRK10276 Location: 13 45473 -13 45587 bp Feature: domain Description: PRK10276 Location: 1345614-1345683 bp Feature: domain Description: PRK10276 Location: 13 45614-13 45683 bp Feature: gene Location: 1784929-1785492 bp Ori: AHI35182.1 Gene: betI_2 Feature: domain Description: YbjK Location: 1784935-1785472 bp Feature: domain Description: YbjK Location: 178493 5-1785472 bp Feature: gene Location: 1785615-1786595 bp Ori: AHI35183.1 Feature: domain Description: int Location: 1785618-1786545 bp Feature: domain Description: int Location: 1785618-1786545 bp Feature: gene Location: 1787083-1788570 bp Ori: AHI35184.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1787488-1788178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1787488-1788178 bp Feature: gene Location: 1788669-1789613 bp Feature: gene Location: 1789625-1790560 bp Ori: AHI35186.1 Feature: domain Description: Phage_CI_repr Location: 1789709-1789892 bp Feature: domain Description: Phage_CI_repr Location: 1789709-1789892 bp Feature: domain Description: Phage_CI_repr Location: 1790021-1790213 bp Feature: domain Description: Phage_CI_repr Location: 1790021-1790213 bp Feature: domain Description: Phage_CI_C Location: 1790240-1790534 bp Feature: domain Description: Phage_CI_C Location: 1790240-179053 4 bp Feature: gene Location: 2156319-2157458 bp Ori: AHI35551.2 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2156502-2157402 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2156502-2157402 bp Feature: gene Location: 2157629-2157871 bp Ori: AHI35552.1 Gene: dinI_3 Feature: domain Description: DinI Location: 2157680-2157860 bp Feature: domain Description: DinI Location: 2157680-2157860 bp Feature: gene Location: 2158486-2159973 bp Ori: AHI35553.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2158891-2159581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2158891-2159581 bp Feature: gene Location: 2160052-2160471 bp Ori: AHI35554.1 Gene: lexA_2 Feature: domain Description: PRK10276 Location: 2160055-2160466 bp Feature: domain Description: PRK10276 Location: 2160055-2160466 bp Feature: gene Location: 2160474-2161739 bp Ori: AHI35555.1 Gene: dinB_2 Feature: domain Description: umuC Location: 2160477-2161737 bp Feature: domain Description: umuC Location: 2160477-216173 7 bp Feature: gene Location: 2301896-2302600 bp Ori: AHI35705.1 Feature: domain Description: Rve Location: 2301899-2302544 bp Feature: domain Description: Rve Location: 23 01899-23 02544 bp Feature: gene Location: 2302666-2303115 bp Ori: AHI35706.2 Gene: hin_1 Feature: domain Description: PinE Location: 2302675-2303107 bp Feature: domain Description: PinE Location: 23 02675-23 03 107 bp Feature: gene Location: 2304510-2305997 bp Ori: AHI35707.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2304915-2305605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 04915-23 05605 bp Feature: gene Location: 2305990-2306496 bp Ori: AHI35708.1 Gene: lexA_3 Feature: domain Description: PRK10276 Location: 2306080-2306491 bp Feature: domain Description: PRK10276 Location: 23 06080-23 06491 bp Feature: gene Location: 2306498-2307763 bp Ori: AHI35709.1 Gene: dinB_3 Feature: domain Description: umuC Location: 2306501-2307761 bp Feature: domain Description: umuC Location: 23 06501-23 07761 bp Feature: gene Location: 2384210-2384941 bp Ori: ALV39633.1 Feature: domain Description: Laminin_G_3 Location: 2384546-2384885 bp Feature: domain Description: Laminin_G_3 Location: 23 84546-23 84885 bp Feature: gene Location: 2384938-2385147 bp Feature: gene Location: 2385597-2387084 bp Ori: AHI35800.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2386002-2386692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 86002-23 86692 bp Feature: gene Location: 2387162-2387446 bp Feature: gene Location: 2387669-2387917 bp Ori: AHI35801.1 Gene: dinI_4 Feature: domain Description: PRK10597 Location: 2387672-2387912 bp Feature: domain Description: PRK10597 Location: 23 87672-23 87912 bp Feature: gene Location: 3994679-3995299 bp Ori: AHI37375.2 Feature: domain Description: Terminase_2 Location: 3994724-3995222 bp Feature: domain Description: Terminase_2 Location: 3 994724-3 995222 bp Feature: gene Location: 3995357-3995686 bp Ori: AHI37376.1 Feature: domain Description: PRK10276 Location: 3995363-3995516 bp Feature: domain Description: PRK10276 Location: 3 9953 63 -3 995516 bp Feature: gene Location: 3995765-3997252 bp Ori: AHI37377.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3996170-3996860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 996170-3 996860 bp Feature: gene Location: 3997673-3998011 bp Feature: gene Location: 3998011-3998250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), PRK10597 (DNA damage-inducible protein I; Provisional), Terminase_2 (pfam03592)