myRT

myRT report for GCA_000376645.1_ASM37664v1

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Seq: CP005383.1 Mannheimia haemolytica M42548, complete genome (2731870 bp)
Overview 1 RT 1: 317519-330522 bp 2 RT 2: 1803592-1808794 bp Neighborhood of RT #1 [317519, 330533] ECA_wecA PRK00062 RVT-UG2 PRK00566 rpoB Neighborhood of RT #2 [1803592, 1808799] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc YaaA Feature: gene Location: 317519-318583 bp Ori: AGK00839.1 Gene: wecA Feature: domain Description: ECA_wecA Location: 317531-318548 bp Feature: domain Description: ECA_wecA Location: 31 7531 -31 8548 bp Feature: gene Location: 318725-320005 bp Ori: AGK00840.1 Gene: hemL Feature: domain Description: PRK00062 Location: 318731-320000 bp Feature: domain Description: PRK00062 Location: 31 8731 -320000 bp Feature: gene Location: 320257-321567 bp Ori: AGK00841.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 320452-321271 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 320452-321 271 bp Feature: gene Location: 321962-326245 bp Ori: AGK00842.1 Gene: rpoC Feature: domain Description: PRK00566 Location: 321998-326087 bp Feature: domain Description: PRK00566 Location: 321 998-326087 bp Feature: gene Location: 326508-330533 bp Ori: AGK00843.1 Gene: rpoB Feature: domain Description: rpoB Location: 326532-330522 bp Feature: domain Description: rpoB Location: 326532-330522 bp Feature: gene Location: 1803592-1804020 bp Ori: AGK02377.1 Gene: rplM Feature: domain Description: rplM Location: 1803595-1804018 bp Feature: domain Description: rplM Location: 1 803595-1 80401 8 bp Feature: gene Location: 1804037-1804432 bp Ori: AGK02378.1 Gene: rpsI Feature: domain Description: rpsI Location: 1804049-1804430 bp Feature: domain Description: rpsI Location: 1 804049-1 804430 bp Feature: gene Location: 1806114-1806644 bp Ori: AGK02379.1 Feature: domain Description: RVT_N Location: 1806183-1806426 bp Feature: domain Description: RVT_N Location: 1 8061 83-1 806426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1806471-1806639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 806471 -1 806639 bp Feature: gene Location: 1806759-1807223 bp Ori: AGK02380.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1806765-1807131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 806765-1 8071 31 bp Feature: gene Location: 1807220-1807834 bp Ori: AGK02381.1 Feature: domain Description: GIIM Note: maturase Location: 1807232-1807415 bp Feature: domain Description: GIIM Note: maturase Location: 1 807232-1 80741 5 bp Feature: domain Description: HNHc Note: nucleases Location: 1807643-1807799 bp Feature: domain Description: HNHc Note: nucleases Location: 1 807643-1 807799 bp Feature: gene Location: 1807663-1808799 bp Ori: AGK02382.1 Feature: domain Description: YaaA Location: 1808026-1808794 bp Feature: domain Description: YaaA Location: 1 808026-1 808794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), rpoB (TIGR02013), rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)
HNHc (smart00507), YaaA (COG3022)