myRT

myRT report for GCA_000417085.2_ASM41708v2

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Seq: CP011989.1 Klebsiella pneumoniae UHKPC33, complete genome (5329725 bp)
Overview 1 RT 1: 1768567-1775038 bp 2 RT 2: 3127931-3133295 bp 3 RT 3: 3514319-3519873 bp 4 RT 4: 3957729-3961181 bp Neighborhood of RT #1 [1768567, 1775052] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3127931, 3133351] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [3514319, 3519893] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #4 [3957729, 3961237] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1768567-1769991 bp Ori: AKR99493.1 Gene: sbcB Feature: domain Description: SbcB Location: 1768573-1769989 bp Feature: domain Description: SbcB Location: 1 768573-1 769989 bp Feature: gene Location: 1770172-1771335 bp Ori: AKS02911.1 Feature: domain Description: dacD Location: 1770175-1771330 bp Feature: domain Description: dacD Location: 1 7701 75-1 771 330 bp Feature: gene Location: 1771856-1773340 bp Ori: AKR99494.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1772258-1772948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 772258-1 772948 bp Feature: gene Location: 1773422-1773895 bp Ori: AKR99495.1 Feature: domain Description: PRK10016 Location: 1773425-1773884 bp Feature: domain Description: PRK1 001 6 Location: 1 773425-1 773884 bp Feature: gene Location: 1773994-1775052 bp Ori: AKR99496.1 Feature: domain Description: YccC Location: 1774000-1775038 bp Feature: domain Description: YccC Location: 1 774000-1 775038 bp Feature: gene Location: 3127931-3129196 bp Ori: AKS00804.1 Feature: domain Description: umuC Location: 3127934-3129194 bp Feature: domain Description: umuC Location: 31 27934-31 291 94 bp Feature: gene Location: 3129199-3129618 bp Ori: AKS00805.1 Feature: domain Description: PRK10276 Location: 3129202-3129613 bp Feature: domain Description: PRK1 0276 Location: 31 29202-31 2961 3 bp Feature: gene Location: 3129697-3131181 bp Ori: AKS00806.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3130099-3130789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 30099-31 30789 bp Feature: gene Location: 3131799-3132041 bp Ori: AKS00807.1 Feature: domain Description: DinI Location: 3131850-3132030 bp Feature: domain Description: DinI Location: 31 31 850-31 32030 bp Feature: gene Location: 3132212-3133351 bp Ori: AKS00808.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3132395-3133295 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 31 32395-31 33295 bp Feature: gene Location: 3514319-3515197 bp Ori: AKS01178.1 Feature: domain Description: Phage_CI_repr Location: 3514346-3514529 bp Feature: domain Description: Phage_CI_repr Location: 351 4346-351 4529 bp Feature: domain Description: Phage_CI_repr Location: 3514658-3514850 bp Feature: domain Description: Phage_CI_repr Location: 351 4658-351 4850 bp Feature: domain Description: Phage_CI_C Location: 3514877-3515171 bp Feature: domain Description: Phage_CI_C Location: 351 4877-351 51 71 bp Feature: gene Location: 3515209-3516153 bp Feature: gene Location: 3516252-3517736 bp Ori: AKS01180.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3516654-3517344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 6654-351 7344 bp Feature: gene Location: 3518155-3519207 bp Ori: AKS01181.1 Feature: domain Description: int Location: 3518158-3519157 bp Feature: domain Description: int Location: 351 81 58-351 91 57 bp Feature: gene Location: 3519330-3519893 bp Ori: AKS01182.1 Feature: domain Description: YbjK Location: 3519336-3519873 bp Feature: domain Description: YbjK Location: 351 9336-351 9873 bp Feature: gene Location: 3957729-3958046 bp Ori: AKS01573.1 Feature: domain Description: PRK10276 Location: 3957735-3957849 bp Feature: domain Description: PRK1 0276 Location: 3957735-3957849 bp Feature: domain Description: PRK10276 Location: 3957876-3957945 bp Feature: domain Description: PRK1 0276 Location: 3957876-3957945 bp Feature: gene Location: 3958046-3958285 bp Feature: gene Location: 3958363-3959847 bp Ori: AKS01575.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3958765-3959455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3958765-3959455 bp Feature: gene Location: 3960300-3960509 bp Feature: gene Location: 3960506-3961237 bp Ori: AKS01577.1 Feature: domain Description: Laminin_G_3 Location: 3960827-3961181 bp Feature: domain Description: Laminin_G_3 Location: 3960827-3961 1 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)

Seq: CP011990.1 Klebsiella pneumoniae UHKPC33 plasmid pUHKPC33-162.533kb, complete sequence (162533 bp)
Overview 1 RT 1: 143928-148931 bp Neighborhood of RT #1 [143928, 148933] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 143928-145199 bp Ori: AKS03208.1 Feature: domain Description: umuC Location: 143931-145191 bp Feature: domain Description: umuC Location: 143931-145191 bp Feature: gene Location: 145199-145630 bp Ori: AKS03209.1 Feature: domain Description: PRK10276 Location: 145250-145613 bp Feature: domain Description: PRK102 76 Location: 1452 50-145613 bp Feature: gene Location: 146039-147523 bp Ori: AKS03210.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146441-147131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146441-147131 bp Feature: gene Location: 147757-147987 bp Feature: gene Location: 148508-148933 bp Ori: AKS03212.1 Feature: domain Description: Antirestrict Location: 148643-148931 bp Feature: domain Description: Antirestrict Location: 148643-148931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)