myRT

myRT report for GCA_000417265.2_ASM41726v2

Download annotations/find similar RTs

Seq: CP011985.1 Klebsiella pneumoniae UHKPC07, complete genome (5322270 bp)
Overview 1 RT 1: 1769790-1776261 bp 2 RT 2: 3120350-3125714 bp 3 RT 3: 3505541-3511095 bp 4 RT 4: 3948954-3952406 bp Neighborhood of RT #1 [1769790, 1776275] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3120350, 3125770] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [3505541, 3511115] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #4 [3948954, 3952462] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1769790-1771214 bp Ori: AKR94031.1 Gene: sbcB Feature: domain Description: SbcB Location: 1769796-1771212 bp Feature: domain Description: SbcB Location: 1 769796-1 771 21 2 bp Feature: gene Location: 1771395-1772558 bp Ori: AKR97452.1 Feature: domain Description: dacD Location: 1771398-1772553 bp Feature: domain Description: dacD Location: 1 771 398-1 772553 bp Feature: gene Location: 1773079-1774563 bp Ori: AKR94032.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1773481-1774171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 773481 -1 7741 71 bp Feature: gene Location: 1774645-1775118 bp Ori: AKR94033.1 Feature: domain Description: PRK10016 Location: 1774648-1775107 bp Feature: domain Description: PRK1 001 6 Location: 1 774648-1 7751 07 bp Feature: gene Location: 1775217-1776275 bp Ori: AKR94034.1 Feature: domain Description: YccC Location: 1775223-1776261 bp Feature: domain Description: YccC Location: 1 775223-1 776261 bp Feature: gene Location: 3120350-3121615 bp Ori: AKR95337.1 Feature: domain Description: umuC Location: 3120353-3121613 bp Feature: domain Description: umuC Location: 31 20353-31 21 61 3 bp Feature: gene Location: 3121618-3122037 bp Ori: AKR95338.1 Feature: domain Description: PRK10276 Location: 3121621-3122032 bp Feature: domain Description: PRK1 0276 Location: 31 21 621 -31 22032 bp Feature: gene Location: 3122116-3123600 bp Ori: AKR95339.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3122518-3123208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 2251 8-31 23208 bp Feature: gene Location: 3124218-3124460 bp Ori: AKR95340.1 Feature: domain Description: DinI Location: 3124269-3124449 bp Feature: domain Description: DinI Location: 31 24269-31 24449 bp Feature: gene Location: 3124631-3125770 bp Ori: AKR95341.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3124814-3125714 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 31 2481 4-31 2571 4 bp Feature: gene Location: 3505541-3506419 bp Ori: AKR95708.1 Feature: domain Description: Phage_CI_repr Location: 3505568-3505751 bp Feature: domain Description: Phage_CI_repr Location: 3505568-3505751 bp Feature: domain Description: Phage_CI_repr Location: 3505880-3506072 bp Feature: domain Description: Phage_CI_repr Location: 3505880-3506072 bp Feature: domain Description: Phage_CI_C Location: 3506099-3506393 bp Feature: domain Description: Phage_CI_C Location: 3506099-3506393 bp Feature: gene Location: 3506431-3507375 bp Feature: gene Location: 3507474-3508958 bp Ori: AKR95710.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3507876-3508566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3507876-3508566 bp Feature: gene Location: 3509377-3510429 bp Ori: AKR95711.1 Feature: domain Description: int Location: 3509380-3510379 bp Feature: domain Description: int Location: 3509380-351 0379 bp Feature: gene Location: 3510552-3511115 bp Ori: AKR95712.1 Feature: domain Description: YbjK Location: 3510558-3511095 bp Feature: domain Description: YbjK Location: 351 0558-351 1 095 bp Feature: gene Location: 3948954-3949271 bp Ori: AKR96107.1 Feature: domain Description: PRK10276 Location: 3948960-3949074 bp Feature: domain Description: PRK1 0276 Location: 3948960-3949074 bp Feature: domain Description: PRK10276 Location: 3949101-3949170 bp Feature: domain Description: PRK1 0276 Location: 39491 01 -39491 70 bp Feature: gene Location: 3949271-3949510 bp Feature: gene Location: 3949588-3951072 bp Ori: AKR96109.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3949990-3950680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3949990-3950680 bp Feature: gene Location: 3951525-3951734 bp Feature: gene Location: 3951731-3952462 bp Ori: AKR96111.1 Feature: domain Description: Laminin_G_3 Location: 3952052-3952406 bp Feature: domain Description: Laminin_G_3 Location: 3952052-3952406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)