myRT

myRT report for GCA_000422095.1_ASM42209v1

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Seq: CP006574.1 Mannheimia haemolytica D174, complete genome (2702201 bp)
Overview 1 RT 1: 269099-273497 bp 2 RT 2: 1356162-1365151 bp Neighborhood of RT #1 [269099, 273497] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc Neighborhood of RT #2 [1356162, 1365151] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 269099-269527 bp Ori: AGQ39884.1 Feature: domain Description: rplM Location: 269102-269525 bp Feature: domain Description: rplM Location: 2691 02-269525 bp Feature: gene Location: 269544-269939 bp Ori: AGQ39885.1 Feature: domain Description: rpsI Location: 269556-269937 bp Feature: domain Description: rpsI Location: 269556-269937 bp Feature: gene Location: 271621-272151 bp Ori: AGQ40247.1 Feature: domain Description: RVT_N Location: 271690-271933 bp Feature: domain Description: RVT_N Location: 271 690-271 933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271978-272146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271 978-2721 46 bp Feature: gene Location: 272266-272730 bp Ori: AGQ40248.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272272-272638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272272-272638 bp Feature: gene Location: 272727-273341 bp Ori: AGQ40249.1 Feature: domain Description: GIIM Note: maturase Location: 272739-272922 bp Feature: domain Description: GIIM Note: maturase Location: 272739-272922 bp Feature: domain Description: HNHc Note: nucleases Location: 273150-273306 bp Feature: domain Description: HNHc Note: nucleases Location: 2731 50-273306 bp Feature: gene Location: 273363-273497 bp Feature: gene Location: 1356162-1357226 bp Ori: AGQ41231.1 Feature: domain Description: ECA_wecA Location: 1356174-1357191 bp Feature: domain Description: ECA_wecA Location: 1 3561 74-1 3571 91 bp Feature: gene Location: 1357368-1358648 bp Ori: AGQ41232.1 Feature: domain Description: PRK00062 Location: 1357374-1358643 bp Feature: domain Description: PRK00062 Location: 1 357374-1 358643 bp Feature: gene Location: 1358900-1360210 bp Ori: AGQ41233.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1359095-1359914 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 359095-1 35991 4 bp Feature: gene Location: 1360605-1364888 bp Ori: AGQ41234.1 Feature: domain Description: PRK00566 Location: 1360641-1364730 bp Feature: domain Description: PRK00566 Location: 1 360641 -1 364730 bp Feature: gene Location: 1364960-1365151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)