myRT

myRT report for GCA_000422145.1_ASM42214v1

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Seq: CP005972.1 Mannheimia haemolytica D153, complete genome (2681844 bp)
Overview 1 RT 1: 358771-363167 bp 2 RT 2: 1779025-1787979 bp Neighborhood of RT #1 [358771, 363169] GIIM HNHc RVT-GII RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [1779025, 1788014] PRK00566 RVT-UG2 PRK00062 ECA_wecA Feature: gene Location: 358771-358905 bp Feature: gene Location: 358927-359541 bp Ori: AGQ24811.1 Feature: domain Description: GIIM Note: maturase Location: 358939-359122 bp Feature: domain Description: GIIM Note: maturase Location: 358939-3591 22 bp Feature: domain Description: HNHc Note: nucleases Location: 359350-359506 bp Feature: domain Description: HNHc Note: nucleases Location: 359350-359506 bp Feature: gene Location: 359538-360002 bp Ori: AGQ24812.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359544-359910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359544-35991 0 bp Feature: gene Location: 360117-360647 bp Ori: AGQ24813.1 Feature: domain Description: RVT_N Location: 360186-360429 bp Feature: domain Description: RVT_N Location: 3601 86-360429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 360474-360642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 360474-360642 bp Feature: gene Location: 362329-362724 bp Ori: AGQ24336.1 Feature: domain Description: rpsI Location: 362341-362722 bp Feature: domain Description: rpsI Location: 362341 -362722 bp Feature: gene Location: 362741-363169 bp Ori: AGQ24337.1 Feature: domain Description: rplM Location: 362744-363167 bp Feature: domain Description: rplM Location: 362744-3631 67 bp Feature: gene Location: 1779025-1779216 bp Feature: gene Location: 1779288-1783571 bp Ori: AGQ26110.1 Feature: domain Description: PRK00566 Location: 1779324-1783413 bp Feature: domain Description: PRK00566 Location: 1 779324-1 78341 3 bp Feature: gene Location: 1783966-1785276 bp Ori: AGQ26111.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1784161-1784980 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 7841 61 -1 784980 bp Feature: gene Location: 1785528-1786808 bp Ori: AGQ26112.1 Feature: domain Description: PRK00062 Location: 1785534-1786803 bp Feature: domain Description: PRK00062 Location: 1 785534-1 786803 bp Feature: gene Location: 1786950-1788014 bp Ori: AGQ26113.1 Feature: domain Description: ECA_wecA Location: 1786962-1787979 bp Feature: domain Description: ECA_wecA Location: 1 786962-1 787979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), rpsI (PRK00132), rplM (PRK09216), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), ECA_wecA (TIGR02380)