myRT

myRT report for GCA_000427055.1_ILRI112

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Seq: HF952106.1 Streptococcus agalactiae ILRI112 complete genome (2029198 bp)
Overview 1 RT 1: 626318-631761 bp 2 RT 2: 647656-658260 bp Neighborhood of RT #1 [626318, 631775] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Neighborhood of RT #2 [647656, 658340] RVT_N RVT-GII GIIM PHA03411 COG4646 HELICc Feature: gene Location: 626318-626755 bp Feature: gene Location: 626932-628137 bp Ori: CCW41740.1 Feature: domain Description: HTH_XRE Location: 626974-627121 bp Feature: domain Description: HTH_XRE Location: 626974-6271 21 bp Feature: domain Description: Rol_Rep_N Location: 627148-627415 bp Feature: domain Description: Rol_Rep_N Location: 6271 48-62741 5 bp Feature: domain Description: Rep_trans Location: 627439-628048 bp Feature: domain Description: Rep_trans Location: 627439-628048 bp Feature: gene Location: 628921-630831 bp Ori: CCW41741.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629254-629992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629254-629992 bp Feature: domain Description: HNHc Note: nucleases Location: 630547-630712 bp Feature: domain Description: HNHc Note: nucleases Location: 630547-63071 2 bp Feature: gene Location: 631010-631159 bp Feature: gene Location: 631278-631775 bp Ori: CCW41743.1 Feature: domain Description: ArdA Location: 631296-631761 bp Feature: domain Description: ArdA Location: 631 296-631 761 bp Feature: gene Location: 647656-648312 bp Feature: gene Location: 648356-649684 bp Feature: gene Location: 649818-651488 bp Ori: CCW41761.1 Feature: domain Description: RVT_N Location: 649863-650106 bp Feature: domain Description: RVT_N Location: 649863-6501 06 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 650151-650799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6501 51 -650799 bp Feature: domain Description: GIIM Note: maturase Location: 650853-651084 bp Feature: domain Description: GIIM Note: maturase Location: 650853-651 084 bp Feature: gene Location: 651558-651695 bp Feature: gene Location: 652044-658340 bp Ori: CCW41763.1 Feature: domain Description: PHA03411 Location: 654561-654867 bp Feature: domain Description: PHA0341 1 Location: 654561 -654867 bp Feature: domain Description: COG4646 Location: 655182-657846 bp Feature: domain Description: COG4646 Location: 6551 82-657846 bp Feature: domain Description: HELICc Location: 657894-658260 bp Feature: domain Description: HELICc Location: 657894-658260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275), RVT_N (pfam13655), GIIM (pfam08388), PHA03411 (putative methyltransferase; Provisional), COG4646 (Adenine-specific DNA methylase, N12 class )
HELICc (smart00490)