myRT

myRT report for GCA_000430425.1_ASM43042v1

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Seq: CP006008.1 Vibrio parahaemolyticus O1:K33 str. CDC_K4557 chromosome I, complete sequence (3331580 bp)
Overview 1 RT 1: 1976279-1984796 bp 2 RT 2: 1987127-1990761 bp Neighborhood of RT #1 [1976279, 1984804] KOG2029 RVT-Retrons HTH_XRE Neighborhood of RT #2 [1987127, 1990761] COG4190 RVT-Retrons Feature: gene Location: 1976279-1980388 bp Ori: AGR00220.1 Feature: domain Description: KOG2029 Location: 1976396-1977053 bp Feature: domain Description: KOG2029 Location: 1 976396-1 977053 bp Feature: gene Location: 1980803-1981006 bp Feature: gene Location: 1981195-1982337 bp Ori: AGR00222.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1981417-1982062 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 981 41 7-1 982062 bp Feature: gene Location: 1982605-1983756 bp Feature: gene Location: 1984595-1984804 bp Ori: AGQ98889.1 Feature: domain Description: HTH_XRE Location: 1984631-1984796 bp Feature: domain Description: HTH_XRE Location: 1 984631 -1 984796 bp Feature: gene Location: 1987127-1987219 bp Feature: gene Location: 1987209-1987583 bp Ori: AGR00228.1 Feature: domain Description: COG4190 Location: 1987239-1987569 bp Feature: domain Description: COG41 90 Location: 1 987239-1 987569 bp Feature: gene Location: 1987723-1988853 bp Ori: AGR00229.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1987945-1988590 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 987945-1 988590 bp Feature: gene Location: 1989036-1990337 bp Feature: gene Location: 1990354-1990761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2029 (KOG2029, Uncharacterized conserved protein ), RVT-Retrons, HTH_XRE (smart00530), COG4190 (Predicted transcriptional regulator )