myRT

myRT report for GCA_000439535.1_ASM43953v1

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Seq: CP004851.1 Alteromonas mediterranea U7 chromosome, complete genome (4442936 bp)
Overview 1 RT 1: 2217628-2223816 bp Neighborhood of RT #1 [2217628, 2223816] PRK03202 RVT_N RVT-GII GIIM HNHc LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 2217628-2218722 bp Ori: AGP89807.1 Feature: domain Description: PRK03202 Location: 2217721-2218669 bp Feature: domain Description: PRK03202 Location: 221 7721 -221 8669 bp Feature: gene Location: 2218757-2219683 bp Feature: gene Location: 2220181-2221752 bp Ori: AGP89809.1 Feature: domain Description: RVT_N Location: 2220184-2220367 bp Feature: domain Description: RVT_N Location: 22201 84-2220367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2220412-2221069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222041 2-2221 069 bp Feature: domain Description: GIIM Note: maturase Location: 2221129-2221354 bp Feature: domain Description: GIIM Note: maturase Location: 2221 1 29-2221 354 bp Feature: domain Description: HNHc Note: nucleases Location: 2221555-2221702 bp Feature: domain Description: HNHc Note: nucleases Location: 2221 555-2221 702 bp Feature: gene Location: 2222057-2223556 bp Ori: AGP89810.1 Feature: domain Description: LZ_Tnp_IS66 Location: 2222138-2222333 bp Feature: domain Description: LZ_Tnp_IS66 Location: 22221 38-2222333 bp Feature: domain Description: zf-IS66 Location: 2222360-2222489 bp Feature: domain Description: zf-IS66 Location: 2222360-2222489 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2222549-2223410 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2222549-222341 0 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2223431-2223539 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2223431 -2223539 bp Feature: gene Location: 2223682-2223816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03202 (ATP-dependent 6-phosphofructokinase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)