myRT

myRT report for GCA_000439735.1_ASM43973v1

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Seq: CP006619.1 Mannheimia haemolytica USMARC_2286, complete genome (2658507 bp)
Overview 1 RT 1: 1213419-1217817 bp 2 RT 2: 2468224-2477213 bp Neighborhood of RT #1 [1213419, 1217817] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc Neighborhood of RT #2 [2468224, 2477213] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1213419-1213847 bp Ori: AGR73736.1 Feature: domain Description: rplM Location: 1213422-1213845 bp Feature: domain Description: rplM Location: 1 21 3422-1 21 3845 bp Feature: gene Location: 1213864-1214259 bp Ori: AGR73737.1 Feature: domain Description: rpsI Location: 1213876-1214257 bp Feature: domain Description: rpsI Location: 1 21 3876-1 21 4257 bp Feature: gene Location: 1215941-1216471 bp Ori: AGR74933.1 Feature: domain Description: RVT_N Location: 1216010-1216253 bp Feature: domain Description: RVT_N Location: 1 21 601 0-1 21 6253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1216298-1216466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 6298-1 21 6466 bp Feature: gene Location: 1216586-1217050 bp Ori: AGR74934.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1216592-1216958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 6592-1 21 6958 bp Feature: gene Location: 1217047-1217661 bp Ori: AGR74935.1 Feature: domain Description: GIIM Note: maturase Location: 1217059-1217242 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 7059-1 21 7242 bp Feature: domain Description: HNHc Note: nucleases Location: 1217470-1217626 bp Feature: domain Description: HNHc Note: nucleases Location: 1 21 7470-1 21 7626 bp Feature: gene Location: 1217683-1217817 bp Feature: gene Location: 2468224-2469288 bp Ori: AGR76167.1 Feature: domain Description: ECA_wecA Location: 2468236-2469253 bp Feature: domain Description: ECA_wecA Location: 2468236-2469253 bp Feature: gene Location: 2469430-2470710 bp Ori: AGR76168.1 Feature: domain Description: PRK00062 Location: 2469436-2470705 bp Feature: domain Description: PRK00062 Location: 2469436-2470705 bp Feature: gene Location: 2470962-2472272 bp Ori: AGR76169.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2471157-2471976 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2471 1 57-2471 976 bp Feature: gene Location: 2472667-2476950 bp Ori: AGR76170.1 Feature: domain Description: PRK00566 Location: 2472703-2476792 bp Feature: domain Description: PRK00566 Location: 2472703-2476792 bp Feature: gene Location: 2477022-2477213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)