myRT

myRT report for GCA_000444405.1_ASM44440v1

Download annotations/find similar RTs

Seq: CP006620.1 Enterococcus faecium Aus0085, complete genome (2994661 bp)
Overview 1 RT 1: 556648-570606 bp 2 RT 2: 727195-732209 bp 3 RT 3: 1896602-1901804 bp 4 RT 4: 2832859-2838327 bp 5 RT 5: 2840644-2846098 bp Neighborhood of RT #1 [556648, 570824] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA TcpE AAA_10 RVT-GII AAA_10 7tmA_5-HT1A_invertebrates 7tmA_5-HT1A_invertebrates Neighborhood of RT #2 [727195, 732217] DUF3801 RVT-GII Intron_maturas2 HNHc VirD4 Maff2 Neighborhood of RT #3 [1896602, 1901875] AAA_10 RVT-GII AAA_10 TcpE Neighborhood of RT #4 [2832859, 2838440] RelB_DinJ FtsK_SpoIIIE RVT-GII DDE_Tnp_1_4 group_II_RT_mat HNHc Neighborhood of RT #5 [2840644, 2846625] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA NT_2-5OAS_ClassI-CCAase Feature: gene Location: 556648-558033 bp Ori: AGS74482.1 Feature: domain Description: FtsK Location: 557257-557890 bp Feature: domain Description: FtsK Location: 557257-557890 bp Feature: gene Location: 558211-559416 bp Ori: AGS74483.1 Feature: domain Description: HTH_XRE Location: 558256-558400 bp Feature: domain Description: HTH_XRE Location: 558256-558400 bp Feature: domain Description: Rol_Rep_N Location: 558427-558694 bp Feature: domain Description: Rol_Rep_N Location: 558427-558694 bp Feature: domain Description: Rep_trans Location: 558718-559327 bp Feature: domain Description: Rep_trans Location: 55871 8-559327 bp Feature: gene Location: 560200-562110 bp Ori: AGS74484.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 560533-561271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 560533-561 271 bp Feature: domain Description: HNHc Note: nucleases Location: 561826-561991 bp Feature: domain Description: HNHc Note: nucleases Location: 561 826-561 991 bp Feature: gene Location: 562555-563052 bp Ori: AGS74485.1 Feature: domain Description: ArdA Location: 562573-563038 bp Feature: domain Description: ArdA Location: 562573-563038 bp Feature: gene Location: 563141-563533 bp Ori: AGS74486.1 Feature: domain Description: TcpE Location: 563159-563459 bp Feature: domain Description: TcpE Location: 5631 59-563459 bp Feature: gene Location: 563517-565070 bp Ori: AGS74487.1 Feature: domain Description: AAA_10 Location: 564849-565035 bp Feature: domain Description: AAA_1 0 Location: 564849-565035 bp Feature: gene Location: 565767-567593 bp Ori: AGS74488.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 566067-566766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 566067-566766 bp Feature: gene Location: 567727-568644 bp Ori: AGS74489.1 Feature: domain Description: AAA_10 Location: 567730-568612 bp Feature: domain Description: AAA_1 0 Location: 567730-56861 2 bp Feature: gene Location: 568647-570824 bp Ori: AGS74490.1 Feature: domain Description: 7tmA_5-HT1A_invertebrates Location: 568950-569208 bp Feature: domain Description: 7tmA_5-HT1 A_invertebrates Location: 568950-569208 bp Feature: domain Description: 7tmA_5-HT1A_invertebrates Location: 570159-570606 bp Feature: domain Description: 7tmA_5-HT1 A_invertebrates Location: 5701 59-570606 bp Feature: gene Location: 727195-727671 bp Ori: AGS74643.1 Feature: domain Description: DUF3801 Location: 727252-727642 bp Feature: domain Description: DUF3801 Location: 727252-727642 bp Feature: gene Location: 727668-728168 bp Feature: gene Location: 728728-730545 bp Ori: AGS74645.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 728992-729811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 728992-72981 1 bp Feature: domain Description: Intron_maturas2 Location: 729883-730186 bp Feature: domain Description: Intron_maturas2 Location: 729883-7301 86 bp Feature: domain Description: HNHc Note: nucleases Location: 730366-730510 bp Feature: domain Description: HNHc Note: nucleases Location: 730366-73051 0 bp Feature: gene Location: 730636-731979 bp Ori: AGS74646.1 Feature: domain Description: VirD4 Location: 730678-731842 bp Feature: domain Description: VirD4 Location: 730678-731 842 bp Feature: gene Location: 732056-732217 bp Ori: AGS74647.1 Feature: domain Description: Maff2 Location: 732059-732209 bp Feature: domain Description: Maff2 Location: 732059-732209 bp Feature: gene Location: 1896602-1897291 bp Ori: AGS75833.1 Feature: domain Description: AAA_10 Location: 1896605-1897277 bp Feature: domain Description: AAA_1 0 Location: 1 896605-1 897277 bp Feature: gene Location: 1897425-1898084 bp Feature: gene Location: 1898101-1899252 bp Ori: AGS75835.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1898401-1899100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 898401 -1 8991 00 bp Feature: gene Location: 1899949-1901499 bp Ori: AGS75836.1 Feature: domain Description: AAA_10 Location: 1901278-1901461 bp Feature: domain Description: AAA_1 0 Location: 1 901 278-1 901 461 bp Feature: gene Location: 1901486-1901875 bp Ori: AGS75837.1 Feature: domain Description: TcpE Location: 1901504-1901804 bp Feature: domain Description: TcpE Location: 1 901 504-1 901 804 bp Feature: gene Location: 2832859-2833203 bp Ori: AGS76743.1 Feature: domain Description: RelB_DinJ Location: 2833069-2833195 bp Feature: domain Description: RelB_DinJ Location: 2833069-28331 95 bp Feature: gene Location: 2833272-2834288 bp Ori: AGS76744.1 Feature: domain Description: FtsK_SpoIIIE Location: 2833929-2834169 bp Feature: domain Description: FtsK_SpoIIIE Location: 2833929-28341 69 bp Feature: gene Location: 2834882-2835904 bp Ori: AGS76745.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2835248-2835890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2835248-2835890 bp Feature: gene Location: 2836092-2837411 bp Ori: AGS76746.1 Feature: domain Description: DDE_Tnp_1_4 Location: 2836122-2837400 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 28361 22-2837400 bp Feature: gene Location: 2837535-2838440 bp Ori: AGS76747.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 2837556-2837850 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2837556-2837850 bp Feature: domain Description: HNHc Note: nucleases Location: 2838168-2838327 bp Feature: domain Description: HNHc Note: nucleases Location: 28381 68-2838327 bp Feature: gene Location: 2840644-2841828 bp Ori: AGS76752.1 Feature: domain Description: HTH_XRE Location: 2840674-2840818 bp Feature: domain Description: HTH_XRE Location: 2840674-284081 8 bp Feature: domain Description: Rol_Rep_N Location: 2840851-2841115 bp Feature: domain Description: Rol_Rep_N Location: 2840851 -2841 1 1 5 bp Feature: domain Description: Rep_trans Location: 2841139-2841751 bp Feature: domain Description: Rep_trans Location: 2841 1 39-2841 751 bp Feature: gene Location: 2841843-2841938 bp Ori: AGS76753.1 Feature: domain Description: DUF3789 Location: 2841852-2841936 bp Feature: domain Description: DUF3789 Location: 2841 852-2841 936 bp Feature: gene Location: 2842708-2844618 bp Ori: AGS76754.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2843041-2843779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2843041 -2843779 bp Feature: domain Description: HNHc Note: nucleases Location: 2844334-2844499 bp Feature: domain Description: HNHc Note: nucleases Location: 2844334-2844499 bp Feature: gene Location: 2844959-2845462 bp Ori: AGS76755.1 Feature: domain Description: ArdA Location: 2844977-2845448 bp Feature: domain Description: ArdA Location: 2844977-2845448 bp Feature: gene Location: 2845588-2846625 bp Ori: AGS76756.1 Feature: domain Description: NT_2-5OAS_ClassI-CCAase Location: 2845681-2846098 bp Feature: domain Description: NT_2-5OAS_ClassI-CCAase Location: 2845681 -2846098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275), TcpE (pfam12648), AAA_10 (pfam12846), 7tmA_5-HT1A_invertebrates (cd15331)
DUF3801 (pfam12687), Intron_maturas2 (pfam01348), VirD4 (COG3505), Maff2 (pfam12750), RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), DDE_Tnp_1_4 (pfam13701), group_II_RT_mat (TIGR04416), DUF3789 (pfam12664), NT_2-5OAS_ClassI-CCAase (cd05400)