myRT

myRT report for GCA_000445405.1_ASM44540v1

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Seq: CP006658.1 Klebsiella pneumoniae JM45 plasmid p2, complete sequence (12207 bp)
Overview 1 RT 1: 8041-11193 bp Neighborhood of RT #1 [8041, 11585] Cloacin_immun Cloacin E2R135 Cytotoxic RVT-GII Feature: gene Location: 8041-8187 bp Ori: AGT26972.1 Feature: domain Description: Cloacin_immun Location: 8044-8173 bp Feature: domain Description: Cloacin_immun Location: 8044-81 73 bp Feature: gene Location: 8308-9996 bp Ori: AGT26973.1 Feature: domain Description: Cloacin Location: 8443-9265 bp Feature: domain Description: Cloacin Location: 8443-9265 bp Feature: domain Description: E2R135 Location: 9274-9679 bp Feature: domain Description: E2R1 35 Location: 9274-9679 bp Feature: domain Description: Cytotoxic Location: 9733-9985 bp Feature: domain Description: Cytotoxic Location: 9733-9985 bp Feature: gene Location: 10101-11585 bp Ori: AGT26974.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10503-11193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0503-1 1 1 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cloacin_immun (pfam03513), Cloacin (pfam03515), E2R135 (pfam11570), Cytotoxic (pfam09000), RVT-GII

Seq: CP006656.1 Klebsiella pneumoniae JM45, complete genome (5273813 bp)
Overview 1 RT 1: 1841156-1847627 bp 2 RT 2: 3159321-3164668 bp 3 RT 3: 3501833-3507444 bp Neighborhood of RT #1 [1841156, 1847641] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3159321, 3164721] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [3501833, 3507464] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Feature: gene Location: 1841156-1842580 bp Ori: AGT23524.1 Feature: domain Description: SbcB Location: 1841162-1842578 bp Feature: domain Description: SbcB Location: 1841162 -1842 578 bp Feature: gene Location: 1842875-1843924 bp Ori: AGT23525.1 Feature: domain Description: dacD Location: 1842878-1843919 bp Feature: domain Description: dacD Location: 1842 878-1843919 bp Feature: gene Location: 1844445-1845929 bp Ori: AGT23526.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1844847-1845537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1844847-1845537 bp Feature: gene Location: 1846011-1846484 bp Ori: AGT23527.1 Feature: domain Description: PRK10016 Location: 1846014-1846473 bp Feature: domain Description: PRK10016 Location: 1846014-1846473 bp Feature: gene Location: 1846583-1847641 bp Ori: AGT23528.1 Feature: domain Description: YccC Location: 1846589-1847627 bp Feature: domain Description: YccC Location: 1846589-184762 7 bp Feature: gene Location: 3159321-3160568 bp Ori: AGT24771.1 Feature: domain Description: umuC Location: 3159324-3160566 bp Feature: domain Description: umuC Location: 315932 4-3160566 bp Feature: gene Location: 3160589-3161008 bp Ori: AGT24772.1 Feature: domain Description: PRK10276 Location: 3160592-3161003 bp Feature: domain Description: PRK102 76 Location: 3160592 -3161003 bp Feature: gene Location: 3161087-3162571 bp Ori: AGT24773.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3161489-3162179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3161489-3162 179 bp Feature: gene Location: 3163193-3163429 bp Ori: AGT24774.1 Feature: domain Description: DinI Location: 3163238-3163418 bp Feature: domain Description: DinI Location: 31632 38-3163418 bp Feature: gene Location: 3163600-3164721 bp Ori: AGT24775.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3163765-3164668 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3163765-3164668 bp Feature: gene Location: 3501833-3502768 bp Ori: AGT25099.1 Feature: domain Description: Phage_CI_repr Location: 3501917-3502100 bp Feature: domain Description: Phage_CI_repr Location: 3501917-3502 100 bp Feature: domain Description: Phage_CI_repr Location: 3502229-3502421 bp Feature: domain Description: Phage_CI_repr Location: 3502 2 2 9-3502 42 1 bp Feature: domain Description: Phage_CI_C Location: 3502448-3502742 bp Feature: domain Description: Phage_CI_C Location: 3502 448-3502 742 bp Feature: gene Location: 3502780-3503724 bp Feature: gene Location: 3503823-3505307 bp Ori: AGT25101.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3504225-3504915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35042 2 5-3504915 bp Feature: gene Location: 3505798-3506778 bp Ori: AGT25102.1 Feature: domain Description: int Location: 3505801-3506728 bp Feature: domain Description: int Location: 3505801-350672 8 bp Feature: gene Location: 3506901-3507464 bp Ori: AGT25103.1 Feature: domain Description: YbjK Location: 3506907-3507444 bp Feature: domain Description: YbjK Location: 3506907-3507444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226)