myRT

myRT report for GCA_000452565.3_ASM45256v3

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Seq: CP047267.1 Pseudomonas syringae UB303 chromosome, complete genome (6141482 bp)
Overview 1 RT 1: 3168622-3173004 bp 2 RT 2: 5793698-5800040 bp Neighborhood of RT #1 [3168622, 3173024] Tar DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII PRK09685 Dehydratase_hem Neighborhood of RT #2 [5793698, 5800040] KOG0713 RVT-UG28 Feature: gene Location: 3168622-3168795 bp Feature: domain Description: Tar Location: 3168625-3168796 bp Feature: domain Description: Tar Location: 31 68625-31 68796 bp Feature: gene Location: 3169029-3169565 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3169032-3169416 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31 69032-31 6941 6 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3169437-3169548 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 31 69437-31 69548 bp Feature: gene Location: 3170046-3170252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3170049-3170247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 70049-31 70247 bp Feature: gene Location: 3170455-3171390 bp Ori: QHF11104.1 Feature: domain Description: PRK09685 Location: 3170497-3171373 bp Feature: domain Description: PRK09685 Location: 31 70497-31 71 373 bp Feature: gene Location: 3171978-3173024 bp Ori: QHF08469.1 Feature: domain Description: Dehydratase_hem Location: 3172110-3173004 bp Feature: domain Description: Dehydratase_hem Location: 31 721 1 0-31 73004 bp Feature: gene Location: 5793698-5794024 bp Feature: gene Location: 5794461-5795477 bp Ori: QHF10720.1 Feature: domain Description: KOG0713 Location: 5794482-5794671 bp Feature: domain Description: KOG071 3 Location: 5794482-5794671 bp Feature: gene Location: 5797276-5798772 bp Ori: QHF10721.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 5797561-5798200 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 5797561 -5798200 bp Feature: gene Location: 5799026-5799295 bp Feature: gene Location: 5799282-5800040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tar (COG0840), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, PRK09685 (DNA-binding transcriptional activator FeaR; Provisional), Dehydratase_hem (pfam13816), KOG0713 (KOG0713, Molecular chaperone (DnaJ superfamily) ), RVT-UG28