myRT

myRT report for GCA_000477035.2_ASM47703v2

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Seq: CP009887.1 Cellulophaga baltica NN016038, complete genome (4560540 bp)
Overview 1 RT 1: 2913998-2921556 bp 2 RT 2: 2974761-2981327 bp 3 RT 3: 3050081-3054429 bp 4 RT 4: 4280440-4286464 bp Neighborhood of RT #1 [2913998, 2921579] Peptidase_S41_IRBP RVT-GII GIIM Asp_protease_2 Asp_protease_2 AraC_binding HTH_ARAC Neighborhood of RT #2 [2974761, 2981347] NIF RVT-GII GIIM SGNH_hydrolase_like_7 YkgB Neighborhood of RT #3 [3050081, 3054713] RVT-GII GIIM Hydrolase_4 MhpC HTH_28 Tra5 Neighborhood of RT #4 [4280440, 4286556] DraG Peptidase_S41_IRBP RVT-GII GIIM Acetyltransf_1 Feature: gene Location: 2913998-2915506 bp Ori: AIY13994.1 Feature: domain Description: Peptidase_S41_IRBP Location: 2914718-2915480 bp Feature: domain Description: Peptidase_S41 _IRBP Location: 291 471 8-291 5480 bp Feature: gene Location: 2917416-2917781 bp Feature: gene Location: 2918450-2919718 bp Ori: AIY13996.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2918645-2919260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 8645-291 9260 bp Feature: domain Description: GIIM Note: maturase Location: 2919335-2919545 bp Feature: domain Description: GIIM Note: maturase Location: 291 9335-291 9545 bp Feature: gene Location: 2919841-2920719 bp Ori: AIY13997.1 Feature: domain Description: Asp_protease_2 Location: 2919946-2920216 bp Feature: domain Description: Asp_protease_2 Location: 291 9946-292021 6 bp Feature: domain Description: Asp_protease_2 Location: 2920378-2920630 bp Feature: domain Description: Asp_protease_2 Location: 2920378-2920630 bp Feature: gene Location: 2920788-2921579 bp Ori: AIY13998.1 Feature: domain Description: AraC_binding Location: 2920848-2921097 bp Feature: domain Description: AraC_binding Location: 2920848-2921 097 bp Feature: domain Description: HTH_ARAC Location: 2921319-2921556 bp Feature: domain Description: HTH_ARAC Location: 2921 31 9-2921 556 bp Feature: gene Location: 2974761-2975291 bp Ori: AIY15368.1 Feature: domain Description: NIF Location: 2974767-2975253 bp Feature: domain Description: NIF Location: 2974767-2975253 bp Feature: gene Location: 2977278-2977643 bp Feature: gene Location: 2978311-2979579 bp Ori: AIY14029.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2978506-2979121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2978506-29791 21 bp Feature: domain Description: GIIM Note: maturase Location: 2979196-2979406 bp Feature: domain Description: GIIM Note: maturase Location: 29791 96-2979406 bp Feature: gene Location: 2979683-2980558 bp Ori: AIY14030.1 Feature: domain Description: SGNH_hydrolase_like_7 Location: 2980028-2980535 bp Feature: domain Description: SGNH_hydrolase_like_7 Location: 2980028-2980535 bp Feature: gene Location: 2980733-2981347 bp Ori: AIY14031.1 Feature: domain Description: YkgB Location: 2980736-2981327 bp Feature: domain Description: YkgB Location: 2980736-2981 327 bp Feature: gene Location: 3050081-3050479 bp Feature: gene Location: 3051170-3052438 bp Ori: AIY14078.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3051365-3051980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3051 365-3051 980 bp Feature: domain Description: GIIM Note: maturase Location: 3052055-3052265 bp Feature: domain Description: GIIM Note: maturase Location: 3052055-3052265 bp Feature: gene Location: 3052547-3053458 bp Ori: AIY14079.1 Feature: domain Description: Hydrolase_4 Location: 3052739-3053090 bp Feature: domain Description: Hydrolase_4 Location: 3052739-3053090 bp Feature: domain Description: MhpC Location: 3053135-3053399 bp Feature: domain Description: MhpC Location: 30531 35-3053399 bp Feature: gene Location: 3053532-3054713 bp Ori: AIY14080.1 Feature: domain Description: HTH_28 Location: 3053565-3053718 bp Feature: domain Description: HTH_28 Location: 3053565-305371 8 bp Feature: domain Description: Tra5 Location: 3053784-3054429 bp Feature: domain Description: Tra5 Location: 3053784-3054429 bp Feature: gene Location: 4280440-4281396 bp Ori: AIY15445.1 Feature: domain Description: DraG Location: 4280449-4281379 bp Feature: domain Description: DraG Location: 4280449-4281 379 bp Feature: gene Location: 4281646-4283082 bp Ori: AIY15030.1 Feature: domain Description: Peptidase_S41_IRBP Location: 4281997-4282984 bp Feature: domain Description: Peptidase_S41 _IRBP Location: 4281 997-4282984 bp Feature: gene Location: 4283181-4284449 bp Ori: AIY15031.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4283376-4283991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4283376-4283991 bp Feature: domain Description: GIIM Note: maturase Location: 4284066-4284276 bp Feature: domain Description: GIIM Note: maturase Location: 4284066-4284276 bp Feature: gene Location: 4285146-4285862 bp Feature: gene Location: 4286065-4286556 bp Ori: AIY15033.1 Feature: domain Description: Acetyltransf_1 Location: 4286164-4286464 bp Feature: domain Description: Acetyltransf_1 Location: 42861 64-4286464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S41_IRBP (cd07563), RVT-GII, GIIM (pfam08388), Asp_protease_2 (pfam13650), AraC_binding (pfam02311), HTH_ARAC (smart00342), NIF (pfam03031), SGNH_hydrolase_like_7 (cd04502), YkgB (COG3059), Hydrolase_4 (pfam12146)
MhpC (COG0596), HTH_28 (pfam13518), Tra5 (COG2801), DraG (COG1397), Acetyltransf_1 (pfam00583)