myRT

myRT report for GCA_000477435.1_ASM47743v1

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Seq: CP004885.1 Candidatus Symbiobacter mobilis CR, complete genome (2991840 bp)
Overview 1 RT 1: 54319-58548 bp 2 RT 2: 1877921-1882158 bp 3 RT 3: 2156130-2162379 bp 4 RT 4: 2664988-2666907 bp Neighborhood of RT #1 [54319, 58548] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM Neighborhood of RT #2 [1877921, 1882241] PTPS_related tol_pal_ybgF GtrA RVT-GII PIN_VapC-like Neighborhood of RT #3 [2156130, 2162379] RVT-GII GIIM sporadsporadsporadTIGR04255 RVT-GII Neighborhood of RT #4 [2664988, 2666907] BrnA_antitoxin RVT-GII Feature: gene Location: 54319-55860 bp Ori: AGX86199.1 Feature: domain Description: COG4584 Location: 54427-55159 bp Feature: domain Description: COG4584 Location: 54427-551 59 bp Feature: domain Description: COG4584 Location: 55294-55792 bp Feature: domain Description: COG4584 Location: 55294-55792 bp Feature: gene Location: 55880-56611 bp Ori: AGX86200.1 Feature: domain Description: IstB_IS21_ATP Location: 55946-56030 bp Feature: domain Description: IstB_IS21 _ATP Location: 55946-56030 bp Feature: domain Description: IstB_IS21 Location: 56033-56567 bp Feature: domain Description: IstB_IS21 Location: 56033-56567 bp Feature: gene Location: 56932-57972 bp Ori: AGX86201.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57115-57463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571 1 5-57463 bp Feature: domain Description: GIIM Note: maturase Location: 57538-57742 bp Feature: domain Description: GIIM Note: maturase Location: 57538-57742 bp Feature: gene Location: 57890-58123 bp Feature: gene Location: 58360-58548 bp Feature: gene Location: 1877921-1880518 bp Ori: AGX87800.1 Feature: domain Description: PTPS_related Location: 1878161-1879541 bp Feature: domain Description: PTPS_related Location: 1 8781 61 -1 879541 bp Feature: domain Description: tol_pal_ybgF Location: 1880171-1880507 bp Feature: domain Description: tol_pal_ybgF Location: 1 8801 71 -1 880507 bp Feature: gene Location: 1880524-1880967 bp Ori: AGX87801.1 Feature: domain Description: GtrA Location: 1880575-1880920 bp Feature: domain Description: GtrA Location: 1 880575-1 880920 bp Feature: gene Location: 1881033-1881401 bp Ori: AGX87802.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1881219-1881375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 881 21 9-1 881 375 bp Feature: gene Location: 1881380-1881556 bp Feature: gene Location: 1881759-1882241 bp Ori: AGX87804.1 Feature: domain Description: PIN_VapC-like Location: 1881810-1882158 bp Feature: domain Description: PIN_VapC-like Location: 1 881 81 0-1 8821 58 bp Feature: gene Location: 2156130-2156228 bp Feature: gene Location: 2156280-2156399 bp Feature: gene Location: 2156398-2157708 bp Ori: AGX88037.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2156614-2157232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 5661 4-21 57232 bp Feature: domain Description: GIIM Note: maturase Location: 2157274-2157478 bp Feature: domain Description: GIIM Note: maturase Location: 21 57274-21 57478 bp Feature: gene Location: 2157755-2158390 bp Feature: gene Location: 2158397-2158690 bp Feature: gene Location: 2158734-2159483 bp Ori: AGX88040.1 Feature: domain Description: sporadsporadsporadTIGR04255 Location: 2158758-2159466 bp Feature: domain Description: sporadsporadsporadTIGR04255 Location: 21 58758-21 59466 bp Feature: gene Location: 2159748-2159882 bp Feature: gene Location: 2160097-2161263 bp Ori: AGX88042.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2160493-2161111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 60493-21 61 1 1 1 bp Feature: gene Location: 2161628-2161822 bp Feature: gene Location: 2161843-2162379 bp Feature: gene Location: 2664988-2665332 bp Feature: gene Location: 2665611-2665982 bp Ori: AGX88480.1 Feature: domain Description: BrnA_antitoxin Location: 2665776-2665947 bp Feature: domain Description: BrnA_antitoxin Location: 2665776-2665947 bp Feature: gene Location: 2666250-2666438 bp Ori: AGX88481.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2666253-2666361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2666253-2666361 bp Feature: gene Location: 2666439-2666702 bp Feature: gene Location: 2666749-2666907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), RVT-GII, GIIM (pfam08388), PTPS_related (pfam10131), tol_pal_ybgF (TIGR02795), GtrA (pfam04138), PIN_VapC-like (cd18715), sporadsporadsporadTIGR04255
BrnA_antitoxin (pfam14384)