myRT

myRT report for GCA_000498395.3_ASM49839v3

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Seq: CP010979.1 Pseudomonas putida S13.1.2, complete genome (6621848 bp)
Overview 1 RT 1: 4194076-4201643 bp 2 RT 2: 4281530-4290357 bp Neighborhood of RT #1 [4194076, 4201660] prfA hemA RVT-GII GIIM TPR TPR TPR TPR lolB Neighborhood of RT #2 [4281530, 4290357] HipA_C HNHc RVT-UG17 TIR-like Feature: gene Location: 4194076-4195158 bp Ori: AJQ49099.1 Gene: prfA Feature: domain Description: prfA Location: 4194079-4195150 bp Feature: domain Description: prfA Location: 41 94079-41 951 50 bp Feature: gene Location: 4195155-4196432 bp Ori: AJQ49100.1 Feature: domain Description: hemA Location: 4195158-4196409 bp Feature: domain Description: hemA Location: 41 951 58-41 96409 bp Feature: gene Location: 4196936-4198303 bp Ori: AJQ49101.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4197269-4197884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 97269-41 97884 bp Feature: domain Description: GIIM Note: maturase Location: 4197944-4198169 bp Feature: domain Description: GIIM Note: maturase Location: 41 97944-41 981 69 bp Feature: gene Location: 4199317-4201038 bp Ori: AJQ49102.1 Feature: domain Description: TPR Location: 4199677-4199944 bp Feature: domain Description: TPR Location: 41 99677-41 99944 bp Feature: domain Description: TPR Location: 4199986-4200256 bp Feature: domain Description: TPR Location: 41 99986-4200256 bp Feature: domain Description: TPR Location: 4200388-4200661 bp Feature: domain Description: TPR Location: 4200388-4200661 bp Feature: domain Description: TPR Location: 4200691-4200967 bp Feature: domain Description: TPR Location: 4200691 -4200967 bp Feature: gene Location: 4201043-4201660 bp Ori: AJQ49103.1 Feature: domain Description: lolB Location: 4201076-4201643 bp Feature: domain Description: lolB Location: 4201 076-4201 643 bp Feature: gene Location: 4281530-4282846 bp Ori: AJQ51298.1 Feature: domain Description: HipA_C Location: 4282034-4282685 bp Feature: domain Description: HipA_C Location: 4282034-4282685 bp Feature: gene Location: 4283880-4284551 bp Ori: AJQ49174.1 Feature: domain Description: HNHc Note: nucleases Location: 4283910-4284114 bp Feature: domain Description: HNHc Note: nucleases Location: 428391 0-42841 1 4 bp Feature: gene Location: 4285556-4286992 bp Ori: AJQ49175.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4285826-4286441 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4285826-4286441 bp Feature: gene Location: 4287969-4288814 bp Ori: AJQ49176.1 Feature: domain Description: TIR-like Location: 4287984-4288338 bp Feature: domain Description: TIR-like Location: 4287984-4288338 bp Feature: gene Location: 4290148-4290357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfA (TIGR00019), hemA (TIGR01035), RVT-GII, GIIM (pfam08388), TPR (smart00028), lolB (TIGR00548), HipA_C (pfam07804), HNHc (smart00507), RVT-UG17, TIR-like (pfam10137)