myRT

myRT report for GCA_000512205.2_ASM51220v2

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Seq: CP011450.1 Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence (374401 bp)
Overview 1 RT 1: 348908-353135 bp Neighborhood of RT #1 [348908, 354742] RVT_N RVT-GII GIIM Spo0J Feature: gene Location: 348908-350401 bp Ori: AKH18970.1 Feature: domain Description: RVT_N Location: 348959-349199 bp Feature: domain Description: RVT_N Location: 348959-3491 99 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349247-349889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349247-349889 bp Feature: domain Description: GIIM Note: maturase Location: 349943-350174 bp Feature: domain Description: GIIM Note: maturase Location: 349943-3501 74 bp Feature: gene Location: 352186-352455 bp Feature: gene Location: 352574-354742 bp Ori: AKH18972.1 Feature: domain Description: Spo0J Location: 352580-353135 bp Feature: domain Description: Spo0J Location: 352580-3531 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Spo0J (COG1475)

Seq: CP006644.1 Sphingomonas sanxanigenens NX02, complete genome (6205897 bp)
Overview 1 RT 1: 689548-697093 bp 2 RT 2: 1643745-1649626 bp 3 RT 3: 1939639-1945682 bp Neighborhood of RT #1 [689548, 697110] PRK06180 RhaT RVT-GII GIIM DepA MsbA_rel Neighborhood of RT #2 [1643745, 1649742] YjgH_like AcrR RVT-GII GIIM GstA MetallophosN MPP_GpdQ MetallophosC Neighborhood of RT #3 [1939639, 1945711] CAD3 ALDH_SSADH1_GabD1 RVT-GII GIIM CAD2 Feature: gene Location: 689548-690393 bp Ori: AHE52428.1 Feature: domain Description: PRK06180 Location: 689551-690370 bp Feature: domain Description: PRK06180 Location: 689551-690370 bp Feature: gene Location: 690465-691421 bp Ori: AHE52429.1 Feature: domain Description: RhaT Location: 690534-691389 bp Feature: domain Description: RhaT Location: 690534-691389 bp Feature: gene Location: 692209-693492 bp Ori: AHE52430.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692452-693115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692 452 -693115 bp Feature: domain Description: GIIM Note: maturase Location: 693184-693403 bp Feature: domain Description: GIIM Note: maturase Location: 693184-693403 bp Feature: gene Location: 693723-694919 bp Ori: AHE52431.1 Feature: domain Description: DepA Location: 693726-694914 bp Feature: domain Description: DepA Location: 69372 6-694914 bp Feature: gene Location: 695275-697110 bp Ori: AHE52432.1 Feature: domain Description: MsbA_rel Location: 695368-697093 bp Feature: domain Description: MsbA_rel Location: 695368-697093 bp Feature: gene Location: 1643745-1644143 bp Ori: AHE53328.1 Feature: domain Description: YjgH_like Location: 1643805-1644126 bp Feature: domain Description: YjgH_like Location: 1643805-164412 6 bp Feature: gene Location: 1644294-1644902 bp Ori: AHE53329.1 Feature: domain Description: AcrR Location: 1644303-1644840 bp Feature: domain Description: AcrR Location: 1644303-1644840 bp Feature: gene Location: 1645648-1646931 bp Ori: AHE53330.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1645891-1646554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1645891-1646554 bp Feature: domain Description: GIIM Note: maturase Location: 1646623-1646842 bp Feature: domain Description: GIIM Note: maturase Location: 164662 3-1646842 bp Feature: gene Location: 1647062-1647661 bp Ori: AHE53331.1 Feature: domain Description: GstA Location: 1647065-1647644 bp Feature: domain Description: GstA Location: 1647065-1647644 bp Feature: gene Location: 1647685-1649742 bp Ori: AHE53332.1 Feature: domain Description: MetallophosN Location: 1647925-1648102 bp Feature: domain Description: MetallophosN Location: 164792 5-1648102 bp Feature: domain Description: MPP_GpdQ Location: 1648318-1648849 bp Feature: domain Description: MPP_GpdQ Location: 1648318-1648849 bp Feature: domain Description: MetallophosC Location: 1648933-1649626 bp Feature: domain Description: MetallophosC Location: 1648933-164962 6 bp Feature: gene Location: 1939639-1940658 bp Ori: AHE53596.1 Feature: domain Description: CAD3 Location: 1939642-1940647 bp Feature: domain Description: CAD3 Location: 1939642 -1940647 bp Feature: gene Location: 1940748-1942172 bp Ori: AHE53597.1 Feature: domain Description: ALDH_SSADH1_GabD1 Location: 1940865-1942143 bp Feature: domain Description: ALDH_SSADH1_GabD1 Location: 1940865-1942 143 bp Feature: gene Location: 1942633-1943478 bp Ori: AHE53598.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1942639-1942990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1942 639-1942 990 bp Feature: domain Description: GIIM Note: maturase Location: 1943053-1943263 bp Feature: domain Description: GIIM Note: maturase Location: 1943053-19432 63 bp Feature: gene Location: 1943500-1943811 bp Feature: gene Location: 1944701-1945711 bp Ori: AHE53600.1 Feature: domain Description: CAD2 Location: 1944713-1945682 bp Feature: domain Description: CAD2 Location: 1944713-1945682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06180 (short chain dehydrogenase; Provisional), RhaT (TIGR00776), RVT-GII, GIIM (pfam08388), DepA (COG4553), MsbA_rel (TIGR02204), YjgH_like (cd02198), AcrR (COG1309), GstA (COG0625), MetallophosN (pfam16371)
MPP_GpdQ (cd07402), MetallophosC (pfam16370), CAD3 (cd08297), ALDH_SSADH1_GabD1 (cd07100), CAD2 (cd08298)