myRT

myRT report for GCA_000520055.1_ASM52005v1

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Seq: CP006262.1 Escherichia coli O145:H28 str. RM13516, complete genome (5402276 bp)
Overview 1 RT 1: 1510192-1515182 bp Neighborhood of RT #1 [1510192, 1515220] PHA02517 RVT-GII GIIM PHA02517 PL1_Passenger_AT Feature: gene Location: 1510192-1510671 bp Ori: AHG14195.1 Feature: domain Description: PHA02517 Location: 1510252-1510606 bp Feature: domain Description: PHA0251 7 Location: 1 51 0252-1 51 0606 bp Feature: gene Location: 1510968-1511081 bp Feature: gene Location: 1511263-1512786 bp Ori: AHG14197.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1511536-1512268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 1 536-1 51 2268 bp Feature: domain Description: GIIM Note: maturase Location: 1512343-1512541 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 2343-1 51 2541 bp Feature: gene Location: 1512978-1513349 bp Ori: AHG14198.1 Feature: domain Description: PHA02517 Location: 1512981-1513347 bp Feature: domain Description: PHA0251 7 Location: 1 51 2981 -1 51 3347 bp Feature: gene Location: 1513352-1515220 bp Ori: AHG14199.1 Feature: domain Description: PL1_Passenger_AT Location: 1514483-1515182 bp Feature: domain Description: PL1 _Passenger_AT Location: 1 51 4483-1 51 51 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PL1_Passenger_AT (cd01343)