myRT

myRT report for GCA_000521655.1_ASM52165v1

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Seq: CP006943.1 Mannheimia varigena USDA-ARS-USMARC-1296, complete genome (2245238 bp)
Overview 1 RT 1: 1496985-1501683 bp 2 RT 2: 1536235-1541725 bp Neighborhood of RT #1 [1496985, 1501691] cas1_DVULG RVT-AbiP2 cas4 Cas7_I-C Neighborhood of RT #2 [1536235, 1541725] MarC PRK10636 RVT-Retrons Feature: gene Location: 1496985-1497998 bp Ori: AHG75928.1 Feature: domain Description: cas1_DVULG Location: 1496994-1497993 bp Feature: domain Description: cas1 _DVULG Location: 1 496994-1 497993 bp Feature: gene Location: 1498455-1498637 bp Feature: gene Location: 1498646-1499863 bp Ori: AHG75930.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1498829-1499276 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 498829-1 499276 bp Feature: gene Location: 1500157-1500828 bp Ori: AHG75931.1 Feature: domain Description: cas4 Location: 1500238-1500769 bp Feature: domain Description: cas4 Location: 1 500238-1 500769 bp Feature: gene Location: 1500828-1501691 bp Ori: AHG75932.1 Feature: domain Description: Cas7_I-C Location: 1500846-1501683 bp Feature: domain Description: Cas7_I-C Location: 1 500846-1 501 683 bp Feature: gene Location: 1536235-1536852 bp Ori: AHG75964.1 Feature: domain Description: MarC Location: 1536241-1536844 bp Feature: domain Description: MarC Location: 1 536241 -1 536844 bp Feature: gene Location: 1537120-1539054 bp Ori: AHG75965.1 Feature: domain Description: PRK10636 Location: 1537123-1539049 bp Feature: domain Description: PRK1 0636 Location: 1 5371 23-1 539049 bp Feature: gene Location: 1539170-1539862 bp Ori: AHG75966.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1539173-1539608 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5391 73-1 539608 bp Feature: gene Location: 1540462-1541469 bp Feature: gene Location: 1541495-1541725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas1_DVULG (TIGR03640), RVT-AbiP2, cas4 (TIGR00372), Cas7_I-C (cl01465), MarC (pfam01914), PRK10636 (putative ABC transporter ATP-binding protein; Provisional), RVT-Retrons