myRT

myRT report for GCA_000597905.1_ASM59790v1

Download annotations/find similar RTs

Seq: CP006918.1 Klebsiella pneumoniae 30684/NJST258_2, complete genome (5293301 bp)
Overview 1 RT 1: 1852945-1859416 bp 2 RT 2: 3210788-3216152 bp 3 RT 3: 3553079-3558686 bp Neighborhood of RT #1 [1852945, 1859430] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3210788, 3216208] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [3553079, 3558706] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII RVT-GII int YbjK Feature: gene Location: 1852945-1854369 bp Ori: AHM78650.1 Feature: domain Description: SbcB Location: 1852951-1854367 bp Feature: domain Description: SbcB Location: 1 852951 -1 854367 bp Feature: gene Location: 1854544-1855713 bp Ori: AHM78651.1 Feature: domain Description: dacD Location: 1854553-1855708 bp Feature: domain Description: dacD Location: 1 854553-1 855708 bp Feature: gene Location: 1856231-1857718 bp Ori: AHM78652.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1856636-1857326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 856636-1 857326 bp Feature: gene Location: 1857800-1858273 bp Ori: AHM78653.1 Feature: domain Description: PRK10016 Location: 1857803-1858262 bp Feature: domain Description: PRK1 001 6 Location: 1 857803-1 858262 bp Feature: gene Location: 1858357-1859430 bp Ori: AHM78654.1 Feature: domain Description: YccC Location: 1858378-1859416 bp Feature: domain Description: YccC Location: 1 858378-1 85941 6 bp Feature: gene Location: 3210788-3212053 bp Ori: AHM80111.1 Feature: domain Description: umuC Location: 3210791-3212051 bp Feature: domain Description: umuC Location: 321 0791 -321 2051 bp Feature: gene Location: 3212056-3212475 bp Ori: AHM80112.1 Feature: domain Description: PRK10276 Location: 3212059-3212470 bp Feature: domain Description: PRK1 0276 Location: 321 2059-321 2470 bp Feature: gene Location: 3212554-3214041 bp Ori: AHM80113.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3212959-3213649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 2959-321 3649 bp Feature: gene Location: 3214656-3214898 bp Ori: AHM80114.1 Feature: domain Description: DinI Location: 3214707-3214887 bp Feature: domain Description: DinI Location: 321 4707-321 4887 bp Feature: gene Location: 3215069-3216208 bp Ori: AHM80115.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3215252-3216152 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 321 5252-321 61 52 bp Feature: gene Location: 3553079-3554014 bp Ori: AHM80460.1 Feature: domain Description: Phage_CI_repr Location: 3553163-3553346 bp Feature: domain Description: Phage_CI_repr Location: 35531 63-3553346 bp Feature: domain Description: Phage_CI_repr Location: 3553475-3553667 bp Feature: domain Description: Phage_CI_repr Location: 3553475-3553667 bp Feature: domain Description: Phage_CI_C Location: 3553694-3553988 bp Feature: domain Description: Phage_CI_C Location: 3553694-3553988 bp Feature: gene Location: 3554026-3554970 bp Feature: gene Location: 3555069-3555680 bp Ori: AHM80462.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3555078-3555288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3555078-3555288 bp Feature: gene Location: 3555857-3556552 bp Ori: AHM80463.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3556262-3556442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3556262-3556442 bp Feature: gene Location: 3556953-3558020 bp Ori: AHM80464.1 Feature: domain Description: int Location: 3556971-3557970 bp Feature: domain Description: int Location: 3556971 -3557970 bp Feature: gene Location: 3558143-3558706 bp Ori: AHM80465.1 Feature: domain Description: YbjK Location: 3558149-3558686 bp Feature: domain Description: YbjK Location: 35581 49-3558686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226)