myRT

myRT report for GCA_000597945.2_ASM59794v2

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Seq: CP007448.2 Yersinia enterocolitica LC20, complete genome (4722762 bp)
Overview 1 RT 1: 87510-91756 bp 2 RT 2: 2774294-2778440 bp Neighborhood of RT #1 [87510, 91758] RVT_N RVT-GII GIIM DUF932 RadC Neighborhood of RT #2 [2774294, 2778440] Avd_like RVT-DGRs Feature: gene Location: 87510-87959 bp Feature: gene Location: 88030-88161 bp Feature: gene Location: 88234-89943 bp Ori: AHM71336.1 Gene: ltrA Feature: domain Description: RVT_N Location: 88288-88531 bp Feature: domain Description: RVT_N Location: 88288-88531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88576-89212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88576-8921 2 bp Feature: domain Description: GIIM Note: maturase Location: 89263-89497 bp Feature: domain Description: GIIM Note: maturase Location: 89263-89497 bp Feature: gene Location: 90525-91214 bp Feature: domain Description: DUF932 Location: 90528-91179 bp Feature: domain Description: DUF932 Location: 90528-91 1 79 bp Feature: gene Location: 91285-91758 bp Ori: AHM71338.1 Feature: domain Description: RadC Location: 91321-91756 bp Feature: domain Description: RadC Location: 91 321 -91 756 bp Feature: gene Location: 2774294-2774599 bp Feature: gene Location: 2774670-2775071 bp Ori: ATX62899.1 Feature: domain Description: Avd_like Location: 2774700-2775030 bp Feature: domain Description: Avd_like Location: 2774700-2775030 bp Feature: gene Location: 2775070-2776326 bp Ori: AHM74481.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2775250-2776012 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2775250-277601 2 bp Feature: gene Location: 2776671-2777138 bp Feature: gene Location: 2777277-2778440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF932 (pfam06067), RadC (pfam04002), Avd_like (cd16376), RVT-DGRs

Seq: CP007449.2 Yersinia enterocolitica LC20 plasmid plasmid1_80K, complete sequence (78924 bp)
Overview 1 RT 1: 54030-57872 bp Neighborhood of RT #1 [54030, 57872] PRK13722 DUF932 RVT_N RVT-GII GIIM Feature: gene Location: 54030-54506 bp Ori: AHM76655.2 Feature: domain Description: PRK13722 Location: 54042-54468 bp Feature: domain Description: PRK1372 2 Location: 54042 -54468 bp Feature: gene Location: 54532-55311 bp Ori: AHM76656.2 Feature: domain Description: DUF932 Location: 54619-55276 bp Feature: domain Description: DUF932 Location: 54619-552 76 bp Feature: gene Location: 55803-57512 bp Ori: AHM76657.2 Gene: ltrA Feature: domain Description: RVT_N Location: 55857-56100 bp Feature: domain Description: RVT_N Location: 55857-56100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56145-56781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56145-56781 bp Feature: domain Description: GIIM Note: maturase Location: 56832-57066 bp Feature: domain Description: GIIM Note: maturase Location: 56832 -57066 bp Feature: gene Location: 57585-57716 bp Feature: gene Location: 57753-57872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13722 (lytic transglycosylase; Provisional), DUF932 (pfam06067), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)