myRT

myRT report for GCA_000598005.1_ASM59800v1

Download annotations/find similar RTs

Seq: CP006923.1 Klebsiella pneumoniae 30660/NJST258_1, complete genome (5263229 bp)
Overview 1 RT 1: 1851722-1858092 bp 2 RT 2: 3167938-3172043 bp 3 RT 3: 3508969-3513864 bp 4 RT 4: 3952216-3955676 bp Neighborhood of RT #1 [1851722, 1858106] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3167938, 3172099] PRK10276 group_II_RT_mat RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [3508969, 3513914] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #4 [3952216, 3955732] PRK10276 PRK10276 RVT-GII RVT-GII Laminin_G_3 Feature: gene Location: 1851722-1853146 bp Ori: AHM84312.1 Feature: domain Description: SbcB Location: 1851728-1853144 bp Feature: domain Description: SbcB Location: 1 851 728-1 8531 44 bp Feature: gene Location: 1853321-1854490 bp Ori: AHM84313.1 Feature: domain Description: dacD Location: 1853330-1854485 bp Feature: domain Description: dacD Location: 1 853330-1 854485 bp Feature: gene Location: 1855087-1856394 bp Ori: AHM84314.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1855414-1855969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 85541 4-1 855969 bp Feature: gene Location: 1856476-1856949 bp Ori: AHM84315.1 Feature: domain Description: PRK10016 Location: 1856479-1856938 bp Feature: domain Description: PRK1 001 6 Location: 1 856479-1 856938 bp Feature: gene Location: 1857033-1858106 bp Ori: AHM84316.1 Feature: domain Description: YccC Location: 1857054-1858092 bp Feature: domain Description: YccC Location: 1 857054-1 858092 bp Feature: gene Location: 3167938-3168357 bp Ori: AHM85745.1 Feature: domain Description: PRK10276 Location: 3167941-3168352 bp Feature: domain Description: PRK1 0276 Location: 31 67941 -31 68352 bp Feature: gene Location: 3168436-3168795 bp Ori: AHM85746.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 3168445-3168661 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31 68445-31 68661 bp Feature: gene Location: 3168789-3169808 bp Ori: AHM85747.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3169071-3169683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 69071 -31 69683 bp Feature: gene Location: 3170547-3170789 bp Ori: AHM85748.1 Feature: domain Description: DinI Location: 3170598-3170778 bp Feature: domain Description: DinI Location: 31 70598-31 70778 bp Feature: gene Location: 3170960-3172099 bp Ori: AHM85749.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3171143-3172043 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 31 71 1 43-31 72043 bp Feature: gene Location: 3508969-3509904 bp Ori: AHM86098.1 Feature: domain Description: Phage_CI_repr Location: 3509053-3509236 bp Feature: domain Description: Phage_CI_repr Location: 3509053-3509236 bp Feature: domain Description: Phage_CI_repr Location: 3509365-3509557 bp Feature: domain Description: Phage_CI_repr Location: 3509365-3509557 bp Feature: domain Description: Phage_CI_C Location: 3509584-3509878 bp Feature: domain Description: Phage_CI_C Location: 3509584-3509878 bp Feature: gene Location: 3509916-3510860 bp Feature: gene Location: 3510959-3511564 bp Ori: AHM86100.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3510962-3511172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 0962-351 1 1 72 bp Feature: gene Location: 3511944-3512546 bp Feature: gene Location: 3512847-3513914 bp Ori: AHM86102.1 Feature: domain Description: int Location: 3512865-3513864 bp Feature: domain Description: int Location: 351 2865-351 3864 bp Feature: gene Location: 3952216-3952533 bp Ori: AHM86538.1 Feature: domain Description: PRK10276 Location: 3952222-3952336 bp Feature: domain Description: PRK1 0276 Location: 3952222-3952336 bp Feature: domain Description: PRK10276 Location: 3952363-3952432 bp Feature: domain Description: PRK1 0276 Location: 3952363-3952432 bp Feature: gene Location: 3952533-3952904 bp Feature: gene Location: 3952850-3953464 bp Ori: AHM86540.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3952853-3953072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3952853-3953072 bp Feature: gene Location: 3953464-3954345 bp Ori: AHM86541.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3953869-3954238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3953869-3954238 bp Feature: gene Location: 3954795-3955004 bp Feature: gene Location: 3955001-3955732 bp Ori: AHM86543.1 Feature: domain Description: Laminin_G_3 Location: 3955322-3955676 bp Feature: domain Description: Laminin_G_3 Location: 3955322-3955676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), group_II_RT_mat (TIGR04416), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), Laminin_G_3 (pfam13385)