myRT

myRT report for GCA_000648515.1_ASM64851v1

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Seq: CP007557.1 Citrobacter freundii CFNIH1, complete genome (5099034 bp)
Overview 1 RT 1: 7951-12572 bp 2 RT 2: 429863-437475 bp 3 RT 3: 1238635-1244224 bp Neighborhood of RT #1 [7951, 12607] COG3911 PHA02517 RVT-GII GIIM InsE Nudix_Hydrolase_26 Neighborhood of RT #2 [429863, 437582] DUF957 HTH_35 RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Neighborhood of RT #3 [1238635, 1244226] PRK09010 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 7951-8499 bp Ori: AHY09972.1 Feature: domain Description: COG3911 Location: 7972-8491 bp Feature: domain Description: COG391 1 Location: 7972-8491 bp Feature: gene Location: 8685-9119 bp Ori: AHY09973.1 Feature: domain Description: PHA02517 Location: 8688-9111 bp Feature: domain Description: PHA0251 7 Location: 8688-91 1 1 bp Feature: gene Location: 9242-10765 bp Ori: AHY14617.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9515-10247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951 5-1 0247 bp Feature: domain Description: GIIM Note: maturase Location: 10322-10520 bp Feature: domain Description: GIIM Note: maturase Location: 1 0322-1 0520 bp Feature: gene Location: 11824-12102 bp Ori: AHY09974.1 Feature: domain Description: InsE Location: 11836-12094 bp Feature: domain Description: InsE Location: 1 1 836-1 2094 bp Feature: gene Location: 12155-12607 bp Ori: AHY09975.1 Feature: domain Description: Nudix_Hydrolase_26 Location: 12173-12572 bp Feature: domain Description: Nudix_Hydrolase_26 Location: 1 21 73-1 2572 bp Feature: gene Location: 429863-430057 bp Ori: AHY10351.1 Feature: domain Description: DUF957 Location: 429875-430037 bp Feature: domain Description: DUF957 Location: 429875-430037 bp Feature: gene Location: 431415-431621 bp Ori: AHY10352.1 Feature: domain Description: HTH_35 Location: 431430-431619 bp Feature: domain Description: HTH_35 Location: 431 430-431 61 9 bp Feature: gene Location: 432403-435618 bp Ori: AHY10353.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 432934-433423 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 432934-433423 bp Feature: domain Description: nitrilase Location: 434932-435529 bp Feature: domain Description: nitrilase Location: 434932-435529 bp Feature: gene Location: 435884-436666 bp Ori: AHY10354.1 Feature: domain Description: AbiEi_3_N Location: 435896-436157 bp Feature: domain Description: AbiEi_3_N Location: 435896-4361 57 bp Feature: domain Description: AbiEi_3 Location: 436172-436625 bp Feature: domain Description: AbiEi_3 Location: 4361 72-436625 bp Feature: gene Location: 436653-437582 bp Ori: AHY10355.1 Feature: domain Description: AbiEii Location: 436692-437475 bp Feature: domain Description: AbiEii Location: 436692-437475 bp Feature: gene Location: 1238635-1239120 bp Ori: AHY11085.1 Feature: domain Description: PRK09010 Location: 1238638-1239118 bp Feature: domain Description: PRK0901 0 Location: 1 238638-1 2391 1 8 bp Feature: gene Location: 1240794-1241240 bp Ori: AHY11086.1 Feature: domain Description: PHA02517 Location: 1240797-1241238 bp Feature: domain Description: PHA0251 7 Location: 1 240797-1 241 238 bp Feature: gene Location: 1241357-1242880 bp Ori: AHY11087.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1241630-1242362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 241 630-1 242362 bp Feature: domain Description: GIIM Note: maturase Location: 1242437-1242635 bp Feature: domain Description: GIIM Note: maturase Location: 1 242437-1 242635 bp Feature: gene Location: 1243472-1243951 bp Ori: AHY11088.1 Feature: domain Description: PHA02517 Location: 1243532-1243886 bp Feature: domain Description: PHA0251 7 Location: 1 243532-1 243886 bp Feature: gene Location: 1243951-1244226 bp Ori: AHY11089.1 Feature: domain Description: InsE Location: 1243993-1244224 bp Feature: domain Description: InsE Location: 1 243993-1 244224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3911 (Predicted ATPase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), Nudix_Hydrolase_26 (cd04685), DUF957, HTH_35 (pfam13693), RVT-UG5, nitrilase (cl11424)
AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843), PRK09010 (single-stranded DNA-binding protein; Provisional)

Seq: CP007558.1 Citrobacter freundii CFNIH1 plasmid pKEC-a3c, complete sequence (272297 bp)
Overview 1 RT 1: 197053-202044 bp Neighborhood of RT #1 [197053, 202049] PHA02517 RVT-GII GIIM PHA02517 quinone_pig3 Feature: gene Location: 197053-197253 bp Feature: gene Location: 197832-198251 bp Ori: AHY14843.1 Feature: domain Description: PHA02517 Location: 197847-198186 bp Feature: domain Description: PHA02 517 Location: 197847-198186 bp Feature: gene Location: 198843-200366 bp Ori: AHY14922.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199116-199848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199116-199848 bp Feature: domain Description: GIIM Note: maturase Location: 199923-200121 bp Feature: domain Description: GIIM Note: maturase Location: 19992 3-2 0012 1 bp Feature: gene Location: 200489-200923 bp Ori: AHY14844.1 Feature: domain Description: PHA02517 Location: 200492-200915 bp Feature: domain Description: PHA02 517 Location: 2 00492 -2 00915 bp Feature: gene Location: 201048-202049 bp Ori: AHY14845.1 Feature: domain Description: quinone_pig3 Location: 201072-202044 bp Feature: domain Description: quinone_pig3 Location: 2 01072 -2 02 044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), quinone_pig3 (TIGR02824)