myRT

myRT report for GCA_000688795.1_ASM68879v1

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Seq: CP004861.1 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence (293574 bp)
Overview 1 RT 1: 42608-53994 bp 2 RT 2: 63211-67535 bp 3 RT 3: 95220-108065 bp 4 RT 4: 152411-158910 bp 5 RT 5: 274685-279410 bp Neighborhood of RT #1 [42608, 57236] NlpD Spr RVT-GII Intron_maturas2 HNHc CwlT_like RVT-GII HNHc CwlT_like RVT-GII HNHc CwlT_like TrbL Neighborhood of RT #2 [63211, 67535] DUF3854 LPD1 RVT-GII HNHc Neighborhood of RT #3 [95220, 108065] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII GIIM HNHc Ftsk_gamma Neighborhood of RT #4 [152411, 158910] RVT-GII GIIM Neighborhood of RT #5 [274685, 279421] DDE_Tnp_1 RVT-GII GIIM RhaT Feature: gene Location: 42608-43183 bp Feature: gene Location: 43200-44075 bp Ori: AHZ54814.1 Feature: domain Description: NlpD Location: 43215-43644 bp Feature: domain Description: NlpD Location: 4321 5-43644 bp Feature: domain Description: Spr Location: 43680-44016 bp Feature: domain Description: Spr Location: 43680-4401 6 bp Feature: gene Location: 44235-46058 bp Ori: AHZ54815.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44499-45333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44499-45333 bp Feature: domain Description: Intron_maturas2 Location: 45402-45741 bp Feature: domain Description: Intron_maturas2 Location: 45402-45741 bp Feature: domain Description: HNHc Note: nucleases Location: 45879-46035 bp Feature: domain Description: HNHc Note: nucleases Location: 45879-46035 bp Feature: gene Location: 46634-46828 bp Ori: AHZ54816.1 Feature: domain Description: CwlT_like Location: 46664-46820 bp Feature: domain Description: CwlT_like Location: 46664-46820 bp Feature: gene Location: 46894-48690 bp Ori: AHZ54817.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47152-47857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 52-47857 bp Feature: domain Description: HNHc Note: nucleases Location: 48418-48553 bp Feature: domain Description: HNHc Note: nucleases Location: 4841 8-48553 bp Feature: gene Location: 49002-49220 bp Feature: gene Location: 49463-49630 bp Ori: AHZ54819.1 Feature: domain Description: CwlT_like Location: 49505-49613 bp Feature: domain Description: CwlT_like Location: 49505-4961 3 bp Feature: gene Location: 49746-51551 bp Ori: AHZ54820.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50040-50736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50040-50736 bp Feature: domain Description: HNHc Note: nucleases Location: 51297-51435 bp Feature: domain Description: HNHc Note: nucleases Location: 51 297-51 435 bp Feature: gene Location: 52225-53220 bp Ori: AHZ54821.1 Feature: domain Description: CwlT_like Location: 53074-53197 bp Feature: domain Description: CwlT_like Location: 53074-531 97 bp Feature: gene Location: 53217-57236 bp Ori: AHZ54822.1 Feature: domain Description: TrbL Location: 53496-53994 bp Feature: domain Description: TrbL Location: 53496-53994 bp Feature: gene Location: 63211-64524 bp Ori: AHZ54831.1 Feature: domain Description: DUF3854 Location: 64156-64495 bp Feature: domain Description: DUF3854 Location: 641 56-64495 bp Feature: gene Location: 64514-65311 bp Ori: AHZ54832.1 Feature: domain Description: LPD1 Location: 65060-65255 bp Feature: domain Description: LPD1 Location: 65060-65255 bp Feature: gene Location: 65383-67179 bp Ori: AHZ54833.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65677-66373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65677-66373 bp Feature: domain Description: HNHc Note: nucleases Location: 66973-67048 bp Feature: domain Description: HNHc Note: nucleases Location: 66973-67048 bp Feature: gene Location: 67211-67465 bp Feature: gene Location: 67353-67535 bp Feature: gene Location: 95220-95606 bp Feature: gene Location: 95624-96769 bp Feature: gene Location: 97370-99193 bp Ori: AHZ54865.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97640-98468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97640-98468 bp Feature: domain Description: Intron_maturas2 Location: 98540-98858 bp Feature: domain Description: Intron_maturas2 Location: 98540-98858 bp Feature: domain Description: HNHc Note: nucleases Location: 99011-99164 bp Feature: domain Description: HNHc Note: nucleases Location: 9901 1 -991 64 bp Feature: gene Location: 99332-99478 bp Feature: gene Location: 100160-101950 bp Ori: AHZ54867.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100457-101153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00457-1 01 1 53 bp Feature: domain Description: HNHc Note: nucleases Location: 101693-101825 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 693-1 01 825 bp Feature: gene Location: 102016-102453 bp Feature: gene Location: 103126-105000 bp Ori: AHZ54869.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103426-104131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03426-1 041 31 bp Feature: domain Description: GIIM Note: maturase Location: 104245-104413 bp Feature: domain Description: GIIM Note: maturase Location: 1 04245-1 0441 3 bp Feature: domain Description: HNHc Note: nucleases Location: 104761-104926 bp Feature: domain Description: HNHc Note: nucleases Location: 1 04761 -1 04926 bp Feature: gene Location: 105374-107023 bp Ori: AHZ54870.1 Feature: domain Description: Ftsk_gamma Location: 105968-106148 bp Feature: domain Description: Ftsk_gamma Location: 1 05968-1 061 48 bp Feature: gene Location: 107295-108065 bp Feature: gene Location: 152411-152638 bp Feature: gene Location: 152710-153618 bp Feature: gene Location: 154365-156230 bp Ori: AHZ54920.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154665-155370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 54665-1 55370 bp Feature: domain Description: GIIM Note: maturase Location: 155457-155640 bp Feature: domain Description: GIIM Note: maturase Location: 1 55457-1 55640 bp Feature: gene Location: 156376-156498 bp Feature: gene Location: 158203-158910 bp Feature: gene Location: 274685-275743 bp Ori: AHZ55024.1 Feature: domain Description: DDE_Tnp_1 Location: 275042-275729 bp Feature: domain Description: DDE_Tnp_1 Location: 275042-275729 bp Feature: gene Location: 275895-276074 bp Feature: gene Location: 276248-277555 bp Ori: AHZ55026.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276533-277172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276533-2771 72 bp Feature: domain Description: GIIM Note: maturase Location: 277247-277472 bp Feature: domain Description: GIIM Note: maturase Location: 277247-277472 bp Feature: gene Location: 278549-279421 bp Ori: AHZ55027.1 Feature: domain Description: RhaT Location: 278576-279410 bp Feature: domain Description: RhaT Location: 278576-27941 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like, TrbL (pfam04610), DUF3854 (pfam12965), LPD1 (pfam18796), GIIM (pfam08388)
Ftsk_gamma (smart00843), DDE_Tnp_1 (pfam01609), RhaT (TIGR00776)

Seq: CP004869.1 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB67, complete sequence (67159 bp)
Overview 1 RT 1: 29025-33563 bp Neighborhood of RT #1 [29025, 33622] DDE_Tnp_1 RVT-GII GIIM AbrB Feature: gene Location: 29025-30083 bp Ori: AHZ55297.1 Feature: domain Description: DDE_Tnp_1 Location: 29382-30069 bp Feature: domain Description: DDE_Tnp_1 Location: 2 9382 -30069 bp Feature: gene Location: 30235-30414 bp Feature: gene Location: 30588-31895 bp Ori: AHZ55299.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30873-31512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30873-31512 bp Feature: domain Description: GIIM Note: maturase Location: 31587-31812 bp Feature: domain Description: GIIM Note: maturase Location: 31587-31812 bp Feature: gene Location: 32171-32431 bp Feature: gene Location: 33329-33622 bp Ori: AHZ55301.1 Feature: domain Description: AbrB Location: 33377-33563 bp Feature: domain Description: AbrB Location: 33377-33563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), AbrB (pfam05145)

Seq: CP004858.1 Bacillus thuringiensis serovar kurstaki str. YBT-1520, complete genome (5602565 bp)
Overview 1 RT 1: 207018-210916 bp 2 RT 2: 299944-303671 bp 3 RT 3: 687910-691917 bp 4 RT 4: 1080629-1084023 bp 5 RT 5: 2233818-2240039 bp 6 RT 6: 2592359-2598652 bp 7 RT 7: 3229832-3236176 bp 8 RT 8: 3571693-3576143 bp 9 RT 9: 3745931-3752339 bp 10 RT 10: 3947722-3955779 bp 11 RT 11: 4991582-5000145 bp 12 RT 12: 5131644-5135780 bp 13 RT 13: 5174465-5178385 bp 14 RT 14: 5440638-5444493 bp 15 RT 15: 5563662-5568323 bp Neighborhood of RT #1 [207018, 210921] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 DppB Neighborhood of RT #2 [299944, 303682] XhlA RVT-GII GIIM Holin_SPP1 CwlA SH3b SH3b Neighborhood of RT #3 [687910, 691922] DDE_Tnp_1 RVT-GII GIIM VOC_Bs_YwkD_like Neighborhood of RT #4 [1080629, 1084023] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #5 [2233818, 2240041] NhoA RVT-GII Intron_maturas2 HNHc EstA BclA_C Neighborhood of RT #6 [2592359, 2598660] Lysozyme_like RVT-GII Intron_maturas2 HNHc RimL MgtE Neighborhood of RT #7 [3229832, 3236205] Uup Uup HATPase_BceS-YxdK-YvcQ-like RVT-GII HNHc OmpR Neighborhood of RT #8 [3571693, 3576157] COG4584 RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #9 [3745931, 3752344] GltS_FMN OYE_like_FMN RVT-GII HNHc FadH CdnL Neighborhood of RT #10 [3947722, 3955787] PRK10416 SMC_prok_B RVT-GII HNHc SMC_prok_B rnc Neighborhood of RT #11 [4991582, 5000145] Sipho_tail tape_meas_TP901 RVT-GII HNHc Smc PhageMin_Tail Neighborhood of RT #12 [5131644, 5135780] NupC NupC RVT-GII HNHc Neighborhood of RT #13 [5174465, 5178399] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #14 [5440638, 5444507] UvdE RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #15 [5563662, 5568337] SrmB RRM_BsYxiN_like RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 207018-208076 bp Ori: AHZ48984.1 Feature: domain Description: DDE_Tnp_1 Location: 207375-208062 bp Feature: domain Description: DDE_Tnp_1 Location: 2073 75-208062 bp Feature: gene Location: 208228-208407 bp Feature: gene Location: 208581-209888 bp Ori: AHZ48986.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208866-209505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208866-209505 bp Feature: domain Description: GIIM Note: maturase Location: 209580-209805 bp Feature: domain Description: GIIM Note: maturase Location: 209580-209805 bp Feature: gene Location: 209977-210423 bp Ori: AHZ48987.1 Feature: domain Description: DDE_Tnp_1 Location: 210040-210142 bp Feature: domain Description: DDE_Tnp_1 Location: 210040-210142 bp Feature: gene Location: 210586-210921 bp Ori: AHZ48988.1 Feature: domain Description: DppB Location: 210589-210916 bp Feature: domain Description: DppB Location: 210589-210916 bp Feature: gene Location: 299944-300321 bp Feature: gene Location: 300361-300603 bp Ori: AHZ49087.1 Feature: domain Description: XhlA Location: 300412-300580 bp Feature: domain Description: XhlA Location: 3 00412-3 00580 bp Feature: gene Location: 301129-302403 bp Ori: AHZ49088.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301330-301945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 013 3 0-3 01945 bp Feature: domain Description: GIIM Note: maturase Location: 302005-302212 bp Feature: domain Description: GIIM Note: maturase Location: 3 02005-3 02212 bp Feature: gene Location: 302502-302732 bp Ori: AHZ49089.1 Feature: domain Description: Holin_SPP1 Location: 302514-302718 bp Feature: domain Description: Holin_SPP1 Location: 3 02514-3 02718 bp Feature: gene Location: 302750-303682 bp Ori: AHZ49090.1 Feature: domain Description: CwlA Location: 302759-303251 bp Feature: domain Description: CwlA Location: 3 02759-3 03 251 bp Feature: domain Description: SH3b Location: 303287-303404 bp Feature: domain Description: SH3 b Location: 3 03 287-3 03 404 bp Feature: domain Description: SH3b Location: 303512-303671 bp Feature: domain Description: SH3 b Location: 3 03 512-3 03 671 bp Feature: gene Location: 687910-688968 bp Ori: AHZ49433.1 Feature: domain Description: DDE_Tnp_1 Location: 688267-688954 bp Feature: domain Description: DDE_Tnp_1 Location: 688267-688954 bp Feature: gene Location: 689120-689299 bp Feature: gene Location: 689473-690780 bp Ori: AHZ49435.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689758-690397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689758-6903 97 bp Feature: domain Description: GIIM Note: maturase Location: 690472-690697 bp Feature: domain Description: GIIM Note: maturase Location: 690472-690697 bp Feature: gene Location: 691056-691316 bp Feature: gene Location: 691536-691922 bp Ori: AHZ49437.1 Feature: domain Description: VOC_Bs_YwkD_like Location: 691551-691917 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 691551-691917 bp Feature: gene Location: 1080629-1080985 bp Ori: AHZ49834.1 Feature: domain Description: DDE_Tnp_1 Location: 1080785-1080971 bp Feature: domain Description: DDE_Tnp_1 Location: 1080785-1080971 bp Feature: gene Location: 1081137-1081316 bp Feature: gene Location: 1081490-1082797 bp Ori: AHZ49836.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1081775-1082414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1081775-1082414 bp Feature: domain Description: GIIM Note: maturase Location: 1082489-1082714 bp Feature: domain Description: GIIM Note: maturase Location: 1082489-1082714 bp Feature: gene Location: 1083073-1083330 bp Feature: gene Location: 1083637-1084023 bp Feature: gene Location: 2233818-2234657 bp Ori: AHZ51045.1 Feature: domain Description: NhoA Location: 2233836-2234628 bp Feature: domain Description: NhoA Location: 223 3 83 6-223 4628 bp Feature: gene Location: 2235189-2235470 bp Feature: gene Location: 2236071-2237894 bp Ori: AHZ51047.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2236341-2237169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223 63 41-223 7169 bp Feature: domain Description: Intron_maturas2 Location: 2237241-2237559 bp Feature: domain Description: Intron_maturas2 Location: 223 7241-223 7559 bp Feature: domain Description: HNHc Note: nucleases Location: 2237712-2237865 bp Feature: domain Description: HNHc Note: nucleases Location: 223 7712-223 7865 bp Feature: gene Location: 2238039-2239340 bp Ori: AHZ51048.1 Feature: domain Description: EstA Location: 2238069-2238282 bp Feature: domain Description: EstA Location: 223 8069-223 8282 bp Feature: gene Location: 2239493-2240041 bp Ori: AHZ51049.1 Feature: domain Description: BclA_C Location: 2239631-2240039 bp Feature: domain Description: BclA_C Location: 223 963 1-224003 9 bp Feature: gene Location: 2592359-2592493 bp Feature: gene Location: 2592714-2593295 bp Ori: AHZ51370.1 Feature: domain Description: Lysozyme_like Location: 2592849-2593284 bp Feature: domain Description: Lysozyme_like Location: 2592849-2593 284 bp Feature: gene Location: 2593871-2595694 bp Ori: AHZ51371.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2594135-2594969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259413 5-2594969 bp Feature: domain Description: Intron_maturas2 Location: 2595038-2595377 bp Feature: domain Description: Intron_maturas2 Location: 259503 8-25953 77 bp Feature: domain Description: HNHc Note: nucleases Location: 2595515-2595671 bp Feature: domain Description: HNHc Note: nucleases Location: 2595515-2595671 bp Feature: gene Location: 2596191-2596697 bp Ori: AHZ51372.1 Feature: domain Description: RimL Location: 2596200-2596695 bp Feature: domain Description: RimL Location: 2596200-2596695 bp Feature: gene Location: 2597332-2598660 bp Ori: AHZ51373.1 Feature: domain Description: MgtE Location: 2597347-2598652 bp Feature: domain Description: MgtE Location: 25973 47-2598652 bp Feature: gene Location: 3229832-3231460 bp Ori: AHZ51998.1 Feature: domain Description: Uup Location: 3229841-3230072 bp Feature: domain Description: Uup Location: 3 229841-3 23 0072 bp Feature: domain Description: Uup Location: 3230087-3231296 bp Feature: domain Description: Uup Location: 3 23 0087-3 23 1296 bp Feature: gene Location: 3231912-3232520 bp Ori: AHZ51999.1 Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 3232185-3232509 bp Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 3 23 2185-3 23 2509 bp Feature: gene Location: 3232771-3234576 bp Ori: AHZ52000.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3233065-3233761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 23 3 065-3 23 3 761 bp Feature: domain Description: HNHc Note: nucleases Location: 3234322-3234460 bp Feature: domain Description: HNHc Note: nucleases Location: 3 23 43 22-3 23 4460 bp Feature: gene Location: 3235250-3235357 bp Feature: gene Location: 3235498-3236205 bp Ori: AHZ52002.1 Feature: domain Description: OmpR Location: 3235507-3236176 bp Feature: domain Description: OmpR Location: 3 23 5507-3 23 6176 bp Feature: gene Location: 3571693-3572640 bp Ori: AHZ52342.1 Feature: domain Description: COG4584 Location: 3572107-3572497 bp Feature: domain Description: COG4584 Location: 3 572107-3 572497 bp Feature: gene Location: 3572751-3573011 bp Feature: gene Location: 3573287-3574594 bp Ori: AHZ52344.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3573572-3574211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 573 572-3 574211 bp Feature: domain Description: GIIM Note: maturase Location: 3574286-3574511 bp Feature: domain Description: GIIM Note: maturase Location: 3 574286-3 574511 bp Feature: gene Location: 3574768-3574947 bp Feature: gene Location: 3575099-3576157 bp Ori: AHZ52346.1 Feature: domain Description: DDE_Tnp_1 Location: 3575456-3576143 bp Feature: domain Description: DDE_Tnp_1 Location: 3 575456-3 576143 bp Feature: gene Location: 3745931-3747505 bp Ori: AHZ52497.1 Feature: domain Description: GltS_FMN Location: 3746078-3747440 bp Feature: domain Description: GltS_FMN Location: 3 746078-3 747440 bp Feature: gene Location: 3747573-3748532 bp Ori: AHZ52498.1 Feature: domain Description: OYE_like_FMN Location: 3747624-3748503 bp Feature: domain Description: OYE_like_FMN Location: 3 747624-3 748503 bp Feature: gene Location: 3748584-3750389 bp Ori: AHZ52499.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3748878-3749574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 748878-3 749574 bp Feature: domain Description: HNHc Note: nucleases Location: 3750135-3750273 bp Feature: domain Description: HNHc Note: nucleases Location: 3 75013 5-3 750273 bp Feature: gene Location: 3751052-3751306 bp Ori: AHZ52500.1 Feature: domain Description: FadH Location: 3751139-3751271 bp Feature: domain Description: FadH Location: 3 75113 9-3 751271 bp Feature: gene Location: 3751868-3752344 bp Ori: AHZ52501.1 Feature: domain Description: CdnL Location: 3751886-3752339 bp Feature: domain Description: CdnL Location: 3 751886-3 7523 3 9 bp Feature: gene Location: 3947722-3948711 bp Ori: AHZ52684.1 Feature: domain Description: PRK10416 Location: 3947746-3948688 bp Feature: domain Description: PRK10416 Location: 3 947746-3 948688 bp Feature: gene Location: 3948727-3951666 bp Ori: AHZ52685.1 Feature: domain Description: SMC_prok_B Location: 3948754-3951634 bp Feature: domain Description: SMC_prok_B Location: 3 948754-3 95163 4 bp Feature: gene Location: 3951933-3953738 bp Ori: AHZ52686.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3952227-3952923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 952227-3 952923 bp Feature: domain Description: HNHc Note: nucleases Location: 3953484-3953622 bp Feature: domain Description: HNHc Note: nucleases Location: 3 953 484-3 953 622 bp Feature: gene Location: 3954412-3954903 bp Ori: AHZ52687.1 Feature: domain Description: SMC_prok_B Location: 3954418-3954886 bp Feature: domain Description: SMC_prok_B Location: 3 954418-3 954886 bp Feature: gene Location: 3955050-3955787 bp Ori: AHZ52688.1 Gene: rnc Feature: domain Description: rnc Location: 3955101-3955779 bp Feature: domain Description: rnc Location: 3 955101-3 955779 bp Feature: gene Location: 4991582-4993063 bp Ori: AHZ53771.1 Feature: domain Description: Sipho_tail Location: 4991648-4993061 bp Feature: domain Description: Sipho_tail Location: 4991648-4993 061 bp Feature: gene Location: 4993078-4995519 bp Ori: AHZ53772.1 Feature: domain Description: tape_meas_TP901 Location: 4993168-4993603 bp Feature: domain Description: tape_meas_TP901 Location: 4993 168-4993 603 bp Feature: gene Location: 4995629-4997434 bp Ori: AHZ53773.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4995923-4996619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4995923 -4996619 bp Feature: domain Description: HNHc Note: nucleases Location: 4997180-4997318 bp Feature: domain Description: HNHc Note: nucleases Location: 4997180-49973 18 bp Feature: gene Location: 4998108-4999607 bp Ori: AHZ53774.1 Feature: domain Description: Smc Location: 4998162-4998843 bp Feature: domain Description: Smc Location: 4998162-4998843 bp Feature: domain Description: PhageMin_Tail Location: 4999008-4999509 bp Feature: domain Description: PhageMin_Tail Location: 4999008-4999509 bp Feature: gene Location: 4999828-5000145 bp Feature: gene Location: 5131644-5132825 bp Ori: AHZ53943.1 Feature: domain Description: NupC Location: 5131647-5132823 bp Feature: domain Description: NupC Location: 513 1647-513 2823 bp Feature: gene Location: 5133175-5133462 bp Ori: AHZ53944.1 Feature: domain Description: NupC Location: 5133181-5133460 bp Feature: domain Description: NupC Location: 513 3 181-513 3 460 bp Feature: gene Location: 5133628-5135424 bp Ori: AHZ53945.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5133922-5134618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513 3 922-513 4618 bp Feature: domain Description: HNHc Note: nucleases Location: 5135218-5135293 bp Feature: domain Description: HNHc Note: nucleases Location: 513 5218-513 5293 bp Feature: gene Location: 5135456-5135710 bp Feature: gene Location: 5135598-5135780 bp Feature: gene Location: 5174465-5174785 bp Feature: gene Location: 5174993-5175253 bp Feature: gene Location: 5175529-5176836 bp Ori: AHZ53984.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5175814-5176453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5175814-5176453 bp Feature: domain Description: GIIM Note: maturase Location: 5176528-5176753 bp Feature: domain Description: GIIM Note: maturase Location: 5176528-5176753 bp Feature: gene Location: 5177010-5177189 bp Feature: gene Location: 5177341-5178399 bp Ori: AHZ53986.1 Feature: domain Description: DDE_Tnp_1 Location: 5177698-5178385 bp Feature: domain Description: DDE_Tnp_1 Location: 5177698-51783 85 bp Feature: gene Location: 5440638-5441018 bp Ori: AHZ54267.1 Gene: uvsE Feature: domain Description: UvdE Location: 5440719-5440980 bp Feature: domain Description: UvdE Location: 5440719-5440980 bp Feature: gene Location: 5441101-5441361 bp Feature: gene Location: 5441637-5442944 bp Ori: AHZ54269.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5441922-5442561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5441922-5442561 bp Feature: domain Description: GIIM Note: maturase Location: 5442636-5442861 bp Feature: domain Description: GIIM Note: maturase Location: 544263 6-5442861 bp Feature: gene Location: 5443118-5443297 bp Feature: gene Location: 5443449-5444507 bp Ori: AHZ54271.1 Feature: domain Description: DDE_Tnp_1 Location: 5443806-5444493 bp Feature: domain Description: DDE_Tnp_1 Location: 5443 806-5444493 bp Feature: gene Location: 5563662-5564669 bp Ori: AHZ54376.1 Feature: domain Description: SrmB Location: 5563665-5564436 bp Feature: domain Description: SrmB Location: 5563 665-556443 6 bp Feature: domain Description: RRM_BsYxiN_like Location: 5564445-5564658 bp Feature: domain Description: RRM_BsYxiN_like Location: 5564445-5564658 bp Feature: gene Location: 5564931-5565191 bp Feature: gene Location: 5565467-5566774 bp Ori: AHZ54378.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5565752-5566391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5565752-55663 91 bp Feature: domain Description: GIIM Note: maturase Location: 5566466-5566691 bp Feature: domain Description: GIIM Note: maturase Location: 5566466-5566691 bp Feature: gene Location: 5566948-5567127 bp Feature: gene Location: 5567279-5568337 bp Ori: AHZ54380.1 Feature: domain Description: DDE_Tnp_1 Location: 5567636-5568323 bp Feature: domain Description: DDE_Tnp_1 Location: 556763 6-55683 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), DppB (COG0601), XhlA (pfam10779), Holin_SPP1 (pfam04688), CwlA (COG5632), SH3b (smart00287), VOC_Bs_YwkD_like (cd08352), NhoA (COG2162)
Intron_maturas2 (pfam01348), HNHc (smart00507), EstA (COG1075), BclA_C (pfam18573), Lysozyme_like (pfam13702), RimL (COG1670), MgtE (pfam01769), Uup (COG0488), HATPase_BceS-YxdK-YvcQ-like (cd16948), OmpR (COG0745)
COG4584 (Transposase ), GltS_FMN (cd02808), OYE_like_FMN (cd02933), FadH (COG1902), CdnL (COG1329), PRK10416 (signal recognition particle-docking protein FtsY; Provisional), SMC_prok_B (TIGR02168), rnc (PRK00102), Sipho_tail (pfam05709), tape_meas_TP901 (TIGR01760)
Smc (COG1196), PhageMin_Tail (pfam10145), NupC (COG1972), UvdE (pfam03851), SrmB (COG0513), RRM_BsYxiN_like (cd12500)

Seq: CP004860.1 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence (422692 bp)
Overview 1 RT 1: 3-8577 bp 2 RT 2: 174025-177800 bp 3 RT 3: 216111-225257 bp 4 RT 4: 357471-363629 bp 5 RT 5: 366168-370998 bp Neighborhood of RT #1 [3, 8577] RVT-GII HNHc CwlT_like RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Neighborhood of RT #2 [174025, 177814] Rve RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #3 [216111, 225298] AE_Prim_S_like RVT-UG10 PRK13922 RapH_N TPR TPR Neighborhood of RT #4 [357471, 363629] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII GIIM Neighborhood of RT #5 [366168, 371018] RVT-GII Intron_maturas2 HNHc COG4584 PRK09183 Feature: gene Location: 3-1445 bp Ori: AHZ54418.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-630 bp Feature: domain Description: HNHc Note: nucleases Location: 1191-1329 bp Feature: domain Description: HNHc Note: nucleases Location: 1191-1329 bp Feature: gene Location: 1561-1728 bp Ori: AHZ54419.1 Feature: domain Description: CwlT_like Location: 1603-1711 bp Feature: domain Description: CwlT_like Location: 1603-1711 bp Feature: gene Location: 1971-2189 bp Feature: gene Location: 2501-4297 bp Ori: AHZ54421.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2759-3464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2759-34 64 bp Feature: domain Description: HNHc Note: nucleases Location: 4025-4160 bp Feature: domain Description: HNHc Note: nucleases Location: 4 025-4 160 bp Feature: gene Location: 4366-4557 bp Ori: AHZ54422.1 Feature: domain Description: CwlT_like Location: 4393-4546 bp Feature: domain Description: CwlT_like Location: 4 393-4 54 6 bp Feature: gene Location: 5133-6956 bp Ori: AHZ54423.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5397-6231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5397-6231 bp Feature: domain Description: Intron_maturas2 Location: 6300-6639 bp Feature: domain Description: Intron_maturas2 Location: 6300-6639 bp Feature: domain Description: HNHc Note: nucleases Location: 6777-6933 bp Feature: domain Description: HNHc Note: nucleases Location: 6777-6933 bp Feature: gene Location: 7116-7985 bp Ori: AHZ54424.1 Feature: domain Description: NlpD Location: 7131-7557 bp Feature: domain Description: NlpD Location: 7131-7557 bp Feature: domain Description: Spr Location: 7590-7926 bp Feature: domain Description: Spr Location: 7590-7926 bp Feature: gene Location: 8002-8577 bp Feature: gene Location: 174025-174537 bp Ori: AHZ54552.1 Feature: domain Description: Rve Location: 174031-174529 bp Feature: domain Description: Rve Location: 174 031-174 529 bp Feature: gene Location: 174932-175378 bp Feature: gene Location: 175712-177019 bp Ori: AHZ54554.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175997-176636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175997-176636 bp Feature: domain Description: GIIM Note: maturase Location: 176711-176936 bp Feature: domain Description: GIIM Note: maturase Location: 176711-176936 bp Feature: gene Location: 177193-177372 bp Feature: gene Location: 177524-177814 bp Ori: AHZ54556.1 Feature: domain Description: DDE_Tnp_1 Location: 177626-177800 bp Feature: domain Description: DDE_Tnp_1 Location: 177626-177800 bp Feature: gene Location: 216111-216728 bp Feature: gene Location: 216738-217163 bp Feature: gene Location: 217602-223241 bp Ori: AHZ54586.1 Feature: domain Description: AE_Prim_S_like Location: 217812-218031 bp Feature: domain Description: AE_Prim_S_like Location: 217812-218031 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 219018-219672 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 219018-219672 bp Feature: gene Location: 223517-223729 bp Ori: AHZ54587.1 Feature: domain Description: PRK13922 Location: 223589-223709 bp Feature: domain Description: PRK13922 Location: 223589-223709 bp Feature: gene Location: 224207-225298 bp Ori: AHZ54588.1 Feature: domain Description: RapH_N Location: 224228-224399 bp Feature: domain Description: RapH_N Location: 224 228-224 399 bp Feature: domain Description: TPR Location: 224534-224801 bp Feature: domain Description: TPR Location: 224 534 -224 801 bp Feature: domain Description: TPR Location: 224846-225257 bp Feature: domain Description: TPR Location: 224 84 6-225257 bp Feature: gene Location: 357471-358454 bp Ori: AHZ54715.1 Feature: domain Description: rpsA Location: 357738-358275 bp Feature: domain Description: rpsA Location: 357738-358275 bp Feature: gene Location: 358713-360413 bp Ori: AHZ54716.1 Feature: domain Description: TraG-D_C Location: 358725-359043 bp Feature: domain Description: TraG-D_C Location: 358725-35904 3 bp Feature: domain Description: Ftsk_gamma Location: 359403-359583 bp Feature: domain Description: Ftsk_gamma Location: 3594 03-359583 bp Feature: domain Description: Ftsk_gamma Location: 359736-359910 bp Feature: domain Description: Ftsk_gamma Location: 359736-359910 bp Feature: gene Location: 360646-362520 bp Ori: AHZ54717.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 360946-361651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36094 6-361651 bp Feature: domain Description: GIIM Note: maturase Location: 361765-361933 bp Feature: domain Description: GIIM Note: maturase Location: 361765-361933 bp Feature: gene Location: 363192-363629 bp Feature: gene Location: 366168-366314 bp Feature: gene Location: 366453-368276 bp Ori: AHZ54720.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366723-367551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366723-367551 bp Feature: domain Description: Intron_maturas2 Location: 367623-367941 bp Feature: domain Description: Intron_maturas2 Location: 367623-36794 1 bp Feature: domain Description: HNHc Note: nucleases Location: 368094-368247 bp Feature: domain Description: HNHc Note: nucleases Location: 368094 -36824 7 bp Feature: gene Location: 368981-370276 bp Ori: AHZ54721.1 Feature: domain Description: COG4584 Location: 369395-369785 bp Feature: domain Description: COG4 584 Location: 369395-369785 bp Feature: gene Location: 370266-371018 bp Ori: AHZ54722.1 Feature: domain Description: PRK09183 Location: 370272-370998 bp Feature: domain Description: PRK09183 Location: 370272-370998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like, Intron_maturas2 (pfam01348), NlpD (COG0739), Spr (COG0791), Rve (COG3316), GIIM (pfam08388), DDE_Tnp_1 (pfam01609), AE_Prim_S_like (cl01287)
RVT-UG10, PRK13922 (rod shape-determining protein MreC; Provisional), RapH_N (pfam18801), TPR (smart00028), rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional)