myRT

myRT report for GCA_000691565.1_ASM69156v1

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Seq: CP007620.1 Pseudomonas putida strain DLL-E4, complete genome (6484062 bp)
Overview 1 RT 1: 4089133-4093044 bp 2 RT 2: 4607212-4615334 bp Neighborhood of RT #1 [4089133, 4093044] PRK11139 BKR_like_SDR_like RVT-DGRs Neighborhood of RT #2 [4607212, 4615336] AtoC COG3547 RVT-GII GIIM KAS_III flgL Feature: gene Location: 4089133-4090026 bp Ori: AHZ78258.1 Feature: domain Description: PRK11139 Location: 4089154-4090018 bp Feature: domain Description: PRK1 1 1 39 Location: 40891 54-409001 8 bp Feature: gene Location: 4090125-4090829 bp Ori: AHZ78259.1 Feature: domain Description: BKR_like_SDR_like Location: 4090137-4090821 bp Feature: domain Description: BKR_like_SDR_like Location: 40901 37-4090821 bp Feature: gene Location: 4091855-4092265 bp Ori: AHZ78260.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4091861-4092110 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4091 861 -40921 1 0 bp Feature: gene Location: 4092364-4092591 bp Feature: gene Location: 4092715-4093044 bp Feature: gene Location: 4607212-4608687 bp Ori: AHZ78718.1 Feature: domain Description: AtoC Location: 4607218-4608664 bp Feature: domain Description: AtoC Location: 460721 8-4608664 bp Feature: gene Location: 4609075-4610178 bp Ori: AHZ78719.1 Feature: domain Description: COG3547 Location: 4609144-4610113 bp Feature: domain Description: COG3547 Location: 46091 44-461 01 1 3 bp Feature: gene Location: 4610527-4612047 bp Ori: AHZ78720.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4610983-4611598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 0983-461 1 598 bp Feature: domain Description: GIIM Note: maturase Location: 4611649-4611880 bp Feature: domain Description: GIIM Note: maturase Location: 461 1 649-461 1 880 bp Feature: gene Location: 4612435-4613364 bp Ori: AHZ78721.1 Feature: domain Description: KAS_III Location: 4612441-4613353 bp Feature: domain Description: KAS_III Location: 461 2441 -461 3353 bp Feature: gene Location: 4613771-4615336 bp Ori: AHZ78722.1 Feature: domain Description: flgL Location: 4613777-4615334 bp Feature: domain Description: flgL Location: 461 3777-461 5334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11139 (DNA-binding transcriptional activator GcvA; Provisional), BKR_like_SDR_like (cd05344), RVT-DGRs, AtoC (COG2204), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), KAS_III (cd00830), flgL (PRK12718)