myRT

myRT report for GCA_000695935.1_ASM69593v1

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Seq: CP007732.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKEC-dc3, complete sequence (268334 bp)
Overview 1 RT 1: 194243-202055 bp Neighborhood of RT #1 [194243, 202060] UvrA UvrA PHA02517 RVT-GII GIIM PHA02517 quinone_pig3 Feature: gene Location: 194243-196894 bp Ori: AIA44776.1 Feature: domain Description: UvrA Location: 194291-194639 bp Feature: domain Description: UvrA Location: 1 94291 -1 94639 bp Feature: domain Description: UvrA Location: 194669-196880 bp Feature: domain Description: UvrA Location: 1 94669-1 96880 bp Feature: gene Location: 197843-198262 bp Ori: AIA44777.1 Feature: domain Description: PHA02517 Location: 197858-198197 bp Feature: domain Description: PHA0251 7 Location: 1 97858-1 981 97 bp Feature: gene Location: 198854-200377 bp Ori: AIA44778.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199127-199859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 991 27-1 99859 bp Feature: domain Description: GIIM Note: maturase Location: 199934-200132 bp Feature: domain Description: GIIM Note: maturase Location: 1 99934-2001 32 bp Feature: gene Location: 200500-200934 bp Ori: AIA44779.1 Feature: domain Description: PHA02517 Location: 200503-200926 bp Feature: domain Description: PHA0251 7 Location: 200503-200926 bp Feature: gene Location: 201059-202060 bp Ori: AIA44780.1 Feature: domain Description: quinone_pig3 Location: 201083-202055 bp Feature: domain Description: quinone_pig3 Location: 201 083-202055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrA (COG0178), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), quinone_pig3 (TIGR02824)

Seq: CP007731.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH27, complete genome (5241638 bp)
Overview 1 RT 1: 1704338-1711396 bp 2 RT 2: 2108652-2114069 bp 3 RT 3: 3454347-3460827 bp Neighborhood of RT #1 [1704338, 1711396] YbjK int RVT-GII RVT-GII COG4933 Neighborhood of RT #2 [2108652, 2114071] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [3454347, 3460829] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1704338-1704901 bp Ori: AIA41274.1 Feature: domain Description: YbjK Location: 1704344-1704881 bp Feature: domain Description: YbjK Location: 1704344-1704881 bp Feature: gene Location: 1705024-1706076 bp Ori: AIA41275.1 Feature: domain Description: int Location: 1705027-1706026 bp Feature: domain Description: int Location: 170502 7-170602 6 bp Feature: gene Location: 1706489-1707976 bp Ori: AIA41276.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1706894-1707584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1706894-1707584 bp Feature: gene Location: 1708398-1709885 bp Ori: AIA41277.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1708803-1709493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1708803-1709493 bp Feature: gene Location: 1709974-1710345 bp Ori: AIA41278.1 Feature: domain Description: COG4933 Location: 1709989-1710343 bp Feature: domain Description: COG4933 Location: 1709989-1710343 bp Feature: gene Location: 1710323-1711396 bp Feature: gene Location: 2108652-2109791 bp Ori: AIA41653.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2108835-2109735 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 108835-2 109735 bp Feature: gene Location: 2109962-2110204 bp Ori: AIA41654.1 Feature: domain Description: DinI Location: 2110013-2110193 bp Feature: domain Description: DinI Location: 2 110013-2 110193 bp Feature: gene Location: 2110818-2112305 bp Ori: AIA41655.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2111223-2111913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1112 2 3-2 111913 bp Feature: gene Location: 2112384-2112803 bp Ori: AIA41656.1 Feature: domain Description: PRK10276 Location: 2112387-2112798 bp Feature: domain Description: PRK102 76 Location: 2 112 387-2 112 798 bp Feature: gene Location: 2112806-2114071 bp Ori: AIA41657.1 Feature: domain Description: umuC Location: 2112809-2114069 bp Feature: domain Description: umuC Location: 2 112 809-2 114069 bp Feature: gene Location: 3454347-3455405 bp Ori: AIA42926.1 Feature: domain Description: YccC Location: 3454353-3455391 bp Feature: domain Description: YccC Location: 3454353-3455391 bp Feature: gene Location: 3455504-3455977 bp Ori: AIA42927.1 Feature: domain Description: PRK10016 Location: 3455507-3455966 bp Feature: domain Description: PRK10016 Location: 3455507-3455966 bp Feature: gene Location: 3456058-3457545 bp Ori: AIA42928.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3456463-3457153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3456463-3457153 bp Feature: gene Location: 3458061-3459224 bp Ori: AIA42929.1 Feature: domain Description: dacD Location: 3458064-3459219 bp Feature: domain Description: dacD Location: 3458064-34592 19 bp Feature: gene Location: 3459405-3460829 bp Ori: AIA42930.1 Gene: sbcB Feature: domain Description: SbcB Location: 3459411-3460827 bp Feature: domain Description: SbcB Location: 3459411-346082 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, COG4933 (Predicted transcriptional regulator, contains an HTH and PUA-like domains ), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
dacD (PRK11397), SbcB (COG2925)

Seq: CP007735.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-a41, complete sequence (89770 bp)
Overview 1 RT 1: 19689-25841 bp Neighborhood of RT #1 [19689, 26374] umuC PRK10276 RVT-GII DDE_Tnp_IS1 DDE_Tnp_1_5 Feature: gene Location: 19689-20960 bp Ori: AIA45289.1 Feature: domain Description: umuC Location: 19692-20952 bp Feature: domain Description: umuC Location: 19692-20952 bp Feature: gene Location: 20960-21391 bp Ori: AIA45290.1 Feature: domain Description: PRK10276 Location: 21011-21374 bp Feature: domain Description: PRK10276 Location: 21011-213 74 bp Feature: gene Location: 21798-23243 bp Ori: AIA45291.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22203-22851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22203 -22851 bp Feature: gene Location: 23589-24092 bp Ori: AIA45292.1 Feature: domain Description: DDE_Tnp_IS1 Location: 23700-24090 bp Feature: domain Description: DDE_Tnp_IS1 Location: 23 700-24090 bp Feature: gene Location: 25451-26374 bp Ori: AIA45293.1 Feature: domain Description: DDE_Tnp_1_5 Location: 25508-25841 bp Feature: domain Description: DDE_Tnp_1_5 Location: 25508-25841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400), DDE_Tnp_1_5 (pfam13737)

Seq: CP007734.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-262, complete sequence (338850 bp)
Overview 1 RT 1: 23254-28729 bp 2 RT 2: 143140-150093 bp Neighborhood of RT #1 [23254, 28734] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Neighborhood of RT #2 [143140, 150098] Rep_3 RVT-GII INT_Cre_C COG3436 Feature: gene Location: 23254-23925 bp Ori: AIA44970.1 Feature: domain Description: Plasmid_stab_B Location: 23269-23476 bp Feature: domain Description: Plasmid_stab_B Location: 23269-234 76 bp Feature: domain Description: Plasmid_stab_B Location: 23581-23788 bp Feature: domain Description: Plasmid_stab_B Location: 23581-23788 bp Feature: gene Location: 23928-24902 bp Ori: AIA44971.1 Feature: domain Description: StbA Location: 23934-24879 bp Feature: domain Description: StbA Location: 23934 -24 879 bp Feature: gene Location: 25148-26635 bp Ori: AIA44972.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25553-26243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25553-2624 3 bp Feature: gene Location: 27038-27463 bp Ori: AIA44973.1 Feature: domain Description: PRK10276 Location: 27041-27449 bp Feature: domain Description: PRK10276 Location: 2704 1-274 4 9 bp Feature: gene Location: 27463-28734 bp Ori: AIA44974.1 Feature: domain Description: umuC Location: 27466-28729 bp Feature: domain Description: umuC Location: 274 66-28729 bp Feature: gene Location: 143140-144039 bp Ori: AIA45090.1 Feature: domain Description: Rep_3 Location: 143233-143530 bp Feature: domain Description: Rep_3 Location: 14 3233-14 3530 bp Feature: gene Location: 144360-145421 bp Feature: gene Location: 146277-147722 bp Ori: AIA45092.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146682-147330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 6682-14 7330 bp Feature: gene Location: 147808-148944 bp Ori: AIA45093.1 Feature: domain Description: INT_Cre_C Location: 148231-148885 bp Feature: domain Description: INT_Cre_C Location: 14 8231-14 8885 bp Feature: gene Location: 149751-150098 bp Ori: AIA45094.1 Feature: domain Description: COG3436 Location: 149757-150093 bp Feature: domain Description: COG34 36 Location: 14 9757-150093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rep_3 (pfam01051), INT_Cre_C (cd00799), COG3436 (Transposase )