myRT

myRT report for GCA_000696505.1_ASM69650v1

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Seq: CP006770.1 Streptococcus equi subsp. zooepidemicus CY, complete genome (2107382 bp)
Overview 1 RT 1: 330897-344760 bp 2 RT 2: 814928-819612 bp 3 RT 3: 1141049-1145921 bp Neighborhood of RT #1 [330897, 344855] YdiL T4SS-DNA_transf RVT-GII VirD4 PrgI TraC-F-type RVT_N RVT-GII GIIM TraC-F-type Peptidase_M23 Phage_lysozyme2 Neighborhood of RT #2 [814928, 819617] MobC Relaxase RVT-GII Intron_maturas2 Relaxase YozG Neighborhood of RT #3 [1141049, 1145935] TraG-D_C RVT-GII T4SS-DNA_transf TnpW Feature: gene Location: 330897-331478 bp Ori: AIA68571.1 Feature: domain Description: YdiL Location: 330924-331467 bp Feature: domain Description: YdiL Location: 330924-331 467 bp Feature: gene Location: 332030-333361 bp Ori: AIA68572.1 Feature: domain Description: T4SS-DNA_transf Location: 332417-333305 bp Feature: domain Description: T4SS-DNA_transf Location: 33241 7-333305 bp Feature: gene Location: 334113-336023 bp Ori: AIA68573.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334422-335178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334422-3351 78 bp Feature: gene Location: 336049-336669 bp Ori: AIA68574.1 Feature: domain Description: VirD4 Location: 336124-336565 bp Feature: domain Description: VirD4 Location: 3361 24-336565 bp Feature: gene Location: 336687-336929 bp Feature: gene Location: 337862-338215 bp Ori: AIA68577.1 Feature: domain Description: PrgI Location: 337874-338132 bp Feature: domain Description: PrgI Location: 337874-3381 32 bp Feature: gene Location: 338172-339659 bp Ori: AIA68578.1 Feature: domain Description: TraC-F-type Location: 338490-339342 bp Feature: domain Description: TraC-F-type Location: 338490-339342 bp Feature: gene Location: 340188-341861 bp Ori: AIA68579.1 Feature: domain Description: RVT_N Location: 340260-340500 bp Feature: domain Description: RVT_N Location: 340260-340500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 340548-341208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 340548-341 208 bp Feature: domain Description: GIIM Note: maturase Location: 341277-341496 bp Feature: domain Description: GIIM Note: maturase Location: 341 277-341 496 bp Feature: gene Location: 341866-342834 bp Ori: AIA68580.1 Feature: domain Description: TraC-F-type Location: 341959-342655 bp Feature: domain Description: TraC-F-type Location: 341 959-342655 bp Feature: gene Location: 342831-344855 bp Ori: AIA68581.1 Feature: domain Description: Peptidase_M23 Location: 344277-344490 bp Feature: domain Description: Peptidase_M23 Location: 344277-344490 bp Feature: domain Description: Phage_lysozyme2 Location: 344634-344760 bp Feature: domain Description: Phage_lysozyme2 Location: 344634-344760 bp Feature: gene Location: 814928-815308 bp Ori: AIA68699.1 Feature: domain Description: MobC Location: 815141-815237 bp Feature: domain Description: MobC Location: 81 51 41 -81 5237 bp Feature: gene Location: 815308-815670 bp Ori: AIA68700.1 Feature: domain Description: Relaxase Location: 815338-815635 bp Feature: domain Description: Relaxase Location: 81 5338-81 5635 bp Feature: gene Location: 816207-818009 bp Ori: AIA67594.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816480-817287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 6480-81 7287 bp Feature: domain Description: Intron_maturas2 Location: 817395-817674 bp Feature: domain Description: Intron_maturas2 Location: 81 7395-81 7674 bp Feature: gene Location: 818155-819252 bp Ori: AIA67595.1 Feature: domain Description: Relaxase Location: 818164-818551 bp Feature: domain Description: Relaxase Location: 81 81 64-81 8551 bp Feature: gene Location: 819393-819617 bp Ori: AIA67596.1 Feature: domain Description: YozG Location: 819426-819612 bp Feature: domain Description: YozG Location: 81 9426-81 961 2 bp Feature: gene Location: 1141049-1141597 bp Feature: gene Location: 1141678-1142265 bp Ori: AIA68774.1 Feature: domain Description: TraG-D_C Location: 1141756-1142077 bp Feature: domain Description: TraG-D_C Location: 1 1 41 756-1 1 42077 bp Feature: gene Location: 1142291-1144201 bp Ori: AIA68775.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1142600-1143356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 42600-1 1 43356 bp Feature: gene Location: 1144953-1145696 bp Ori: AIA68776.1 Feature: domain Description: T4SS-DNA_transf Location: 1144965-1145640 bp Feature: domain Description: T4SS-DNA_transf Location: 1 1 44965-1 1 45640 bp Feature: gene Location: 1145771-1145935 bp Ori: AIA68777.1 Feature: domain Description: TnpW Location: 1145822-1145921 bp Feature: domain Description: TnpW Location: 1 1 45822-1 1 45921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdiL (COG1266), T4SS-DNA_transf (pfam02534), RVT-GII, VirD4 (COG3505), PrgI (pfam12666), TraC-F-type (TIGR02746), RVT_N (pfam13655), GIIM (pfam08388), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013)
MobC (pfam05713), Relaxase (pfam03432), Intron_maturas2 (pfam01348), YozG (COG3655), TraG-D_C (pfam12696), TnpW (pfam14202)