myRT

myRT report for GCA_000714655.1_ASM71465v1

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Seq: CP008790.1 Klebsiella oxytoca KONIH1 plasmid pKOX-86d, complete sequence (193725 bp)
Overview 1 RT 1: 139113-145057 bp Neighborhood of RT #1 [139113, 145143] PRK15442 PRK13746 RVT-GII GIIM efflux_Bcr_CflA LbH_XAT Feature: gene Location: 139113-139979 bp Ori: AID93383.1 Feature: domain Description: PRK15442 Location: 139146-139953 bp Feature: domain Description: PRK1 5442 Location: 1 391 46-1 39953 bp Feature: gene Location: 140097-140888 bp Ori: AID93384.1 Feature: domain Description: PRK13746 Location: 140100-140880 bp Feature: domain Description: PRK1 3746 Location: 1 401 00-1 40880 bp Feature: gene Location: 140977-142326 bp Ori: AID93385.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141259-141877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 259-1 41 877 bp Feature: domain Description: GIIM Note: maturase Location: 141925-142129 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 925-1 421 29 bp Feature: gene Location: 143127-144386 bp Ori: AID93386.1 Feature: domain Description: efflux_Bcr_CflA Location: 143160-144303 bp Feature: domain Description: efflux_Bcr_CflA Location: 1 431 60-1 44303 bp Feature: gene Location: 144511-145143 bp Ori: AID93387.1 Feature: domain Description: LbH_XAT Location: 144577-145057 bp Feature: domain Description: LbH_XAT Location: 1 44577-1 45057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15442 (beta-lactamase TEM; Provisional), PRK13746 (aminoglycoside resistance protein; Provisional), RVT-GII, GIIM (pfam08388), efflux_Bcr_CflA (TIGR00710), LbH_XAT (cd03349)

Seq: CP008789.1 Klebsiella oxytoca KONIH1 plasmid pKOX-137, complete sequence (133397 bp)
Overview 1 RT 1: 113821-120348 bp Neighborhood of RT #1 [113821, 120365] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 sopB_N ParB Feature: gene Location: 113821-114492 bp Ori: AID93207.1 Feature: domain Description: Plasmid_stab_B Location: 113836-114043 bp Feature: domain Description: Plasmid_stab_B Location: 113836-114043 bp Feature: domain Description: Plasmid_stab_B Location: 114148-114355 bp Feature: domain Description: Plasmid_stab_B Location: 114148-114355 bp Feature: gene Location: 114495-115469 bp Ori: AID93208.1 Feature: domain Description: StbA Location: 114501-115446 bp Feature: domain Description: StbA Location: 114501-115446 bp Feature: gene Location: 115715-117202 bp Ori: AID93209.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116120-116810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11612 0-116810 bp Feature: gene Location: 117607-118038 bp Ori: AID93210.1 Feature: domain Description: PRK10276 Location: 117658-118021 bp Feature: domain Description: PRK102 76 Location: 117658-11802 1 bp Feature: gene Location: 119391-120365 bp Ori: AID93211.1 Feature: domain Description: sopB_N Location: 119568-119760 bp Feature: domain Description: sopB_N Location: 119568-119760 bp Feature: domain Description: ParB Location: 119973-120348 bp Feature: domain Description: ParB Location: 119973-12 0348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), sopB_N (cd16394), ParB (smart00470)

Seq: CP008788.1 Klebsiella oxytoca KONIH1, complete genome (6152190 bp)
Overview 1 RT 1: 655100-661562 bp 2 RT 2: 5294908-5300917 bp 3 RT 3: 5992266-5999160 bp Neighborhood of RT #1 [655100, 662725] MipA COG3547 RVT-GII GIIM InsE YaaW YaaW Neighborhood of RT #2 [5294908, 5300919] fghA_ester_D COG3547 RVT-GII GIIM PHA02517 PRK11352 Neighborhood of RT #3 [5992266, 5999168] PRK11462 PRK09692 RVT-Retrons Psu Feature: gene Location: 655100-655414 bp Ori: AID88092.1 Feature: domain Description: MipA Location: 655109-655412 bp Feature: domain Description: MipA Location: 655109-655412 bp Feature: gene Location: 655946-657022 bp Ori: AID88093.1 Feature: domain Description: COG3547 Location: 655985-656906 bp Feature: domain Description: COG3 547 Location: 655985-656906 bp Feature: gene Location: 657564-659087 bp Ori: AID88094.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657837-658569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65783 7-658569 bp Feature: domain Description: GIIM Note: maturase Location: 658644-658842 bp Feature: domain Description: GIIM Note: maturase Location: 658644-658842 bp Feature: gene Location: 660131-660433 bp Ori: AID88095.1 Feature: domain Description: InsE Location: 660140-660422 bp Feature: domain Description: InsE Location: 660140-660422 bp Feature: gene Location: 660878-662725 bp Ori: AID88096.1 Feature: domain Description: YaaW Location: 661067-661304 bp Feature: domain Description: YaaW Location: 661067-6613 04 bp Feature: domain Description: YaaW Location: 661343-661562 bp Feature: domain Description: YaaW Location: 6613 43 -661562 bp Feature: gene Location: 5294908-5295744 bp Ori: AID92295.1 Feature: domain Description: fghA_ester_D Location: 5294914-5295730 bp Feature: domain Description: fghA_ester_D Location: 5294914-529573 0 bp Feature: gene Location: 5296237-5297313 bp Ori: AID92296.1 Feature: domain Description: COG3547 Location: 5296276-5297197 bp Feature: domain Description: COG3 547 Location: 5296276-5297197 bp Feature: gene Location: 5297855-5299378 bp Ori: AID92297.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5298128-5298860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5298128-5298860 bp Feature: domain Description: GIIM Note: maturase Location: 5298935-5299133 bp Feature: domain Description: GIIM Note: maturase Location: 529893 5-529913 3 bp Feature: gene Location: 5299970-5300389 bp Ori: AID92298.1 Feature: domain Description: PHA02517 Location: 5299985-5300324 bp Feature: domain Description: PHA02517 Location: 5299985-53 003 24 bp Feature: gene Location: 5300611-5300919 bp Ori: AID92299.1 Feature: domain Description: PRK11352 Location: 5300776-5300917 bp Feature: domain Description: PRK113 52 Location: 53 00776-53 00917 bp Feature: gene Location: 5992266-5993660 bp Ori: AID92937.1 Feature: domain Description: PRK11462 Location: 5992269-5993634 bp Feature: domain Description: PRK11462 Location: 5992269-5993 63 4 bp Feature: gene Location: 5994208-5995374 bp Ori: AID92938.1 Feature: domain Description: PRK09692 Location: 5994217-5995360 bp Feature: domain Description: PRK09692 Location: 5994217-59953 60 bp Feature: gene Location: 5995887-5996813 bp Ori: AID92939.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5995992-5996577 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5995992-5996577 bp Feature: gene Location: 5996800-5997780 bp Feature: gene Location: 5998602-5999168 bp Ori: AID92941.1 Feature: domain Description: Psu Location: 5998620-5999160 bp Feature: domain Description: Psu Location: 5998620-5999160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MipA (pfam06629), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963), YaaW (COG4735), fghA_ester_D (TIGR02821), PHA02517 (putative transposase OrfB; Reviewed), PRK11352 (formaldehyde-responsive transcriptional repressor FrmR), PRK11462 (putative transporter; Provisional)
PRK09692 (Integrase; provisional), RVT-Retrons, Psu (pfam07455)

Seq: CP008791.1 Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence (205586 bp)
Overview 1 RT 1: 39030-45750 bp Neighborhood of RT #1 [39030, 45848] fghA_ester_D COG3547 RVT-GII GIIM PHA02517 DUF2913 Feature: gene Location: 39030-39866 bp Ori: AID93473.1 Feature: domain Description: fghA_ester_D Location: 39036-39852 bp Feature: domain Description: fghA_ester_D Location: 39036-39852 bp Feature: gene Location: 40453-41529 bp Ori: AID93474.1 Feature: domain Description: COG3547 Location: 40492-41413 bp Feature: domain Description: COG354 7 Location: 4 04 92-4 14 13 bp Feature: gene Location: 42071-43594 bp Ori: AID93475.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42344-43076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 234 4 -4 3076 bp Feature: domain Description: GIIM Note: maturase Location: 43151-43349 bp Feature: domain Description: GIIM Note: maturase Location: 4 3151-4 334 9 bp Feature: gene Location: 44186-44611 bp Ori: AID93476.1 Feature: domain Description: PHA02517 Location: 44210-44546 bp Feature: domain Description: PHA02517 Location: 4 4 210-4 4 54 6 bp Feature: gene Location: 45237-45848 bp Ori: AID93477.1 Feature: domain Description: DUF2913 Location: 45270-45750 bp Feature: domain Description: DUF2913 Location: 4 5270-4 5750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fghA_ester_D (TIGR02821), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DUF2913 (pfam11140)