myRT

myRT report for GCA_000714675.1_ASM71467v1

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Seq: CP008798.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH24 plasmid pKPC-484, complete sequence (85473 bp)
Overview 1 RT 1: 68308-74908 bp Neighborhood of RT #1 [68308, 75441] umuC PRK10276 RVT-GII DDE_Tnp_IS1 DDE_Tnp_1_5 Feature: gene Location: 68308-69579 bp Ori: AID98743.1 Feature: domain Description: umuC Location: 68311-69571 bp Feature: domain Description: umuC Location: 6831 1 -69571 bp Feature: gene Location: 69579-70010 bp Ori: AID98744.1 Feature: domain Description: PRK10276 Location: 69630-69993 bp Feature: domain Description: PRK1 0276 Location: 69630-69993 bp Feature: gene Location: 70416-71903 bp Ori: AID98745.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70821-71511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70821 -71 51 1 bp Feature: gene Location: 72249-72752 bp Ori: AID98746.1 Feature: domain Description: DDE_Tnp_IS1 Location: 72360-72750 bp Feature: domain Description: DDE_Tnp_IS1 Location: 72360-72750 bp Feature: gene Location: 74518-75441 bp Ori: AID98747.1 Feature: domain Description: DDE_Tnp_1_5 Location: 74575-74908 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 74575-74908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400), DDE_Tnp_1_5 (pfam13737)

Seq: CP008800.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH24 plasmid pKPN-e44, complete sequence (194877 bp)
Overview 1 RT 1: 131522-136516 bp Neighborhood of RT #1 [131522, 136518] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 131522-132793 bp Ori: AID98935.1 Feature: domain Description: umuC Location: 131525-132788 bp Feature: domain Description: umuC Location: 13152 5-132 788 bp Feature: gene Location: 132793-133218 bp Ori: AID98936.1 Feature: domain Description: PRK10276 Location: 132796-133204 bp Feature: domain Description: PRK102 76 Location: 132 796-1332 04 bp Feature: gene Location: 133621-135108 bp Ori: AID98937.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134026-134716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13402 6-134716 bp Feature: gene Location: 135342-135572 bp Feature: gene Location: 136093-136518 bp Ori: AID98939.1 Feature: domain Description: Antirestrict Location: 136228-136516 bp Feature: domain Description: Antirestrict Location: 1362 2 8-136516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: CP008797.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH24, complete genome (5396164 bp)
Overview 1 RT 1: 2302732-2309203 bp 2 RT 2: 3544374-3549523 bp 3 RT 3: 3741759-3747123 bp 4 RT 4: 4128280-4133834 bp 5 RT 5: 4572999-4576451 bp Neighborhood of RT #1 [2302732, 2309217] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3544374, 3549531] umuC PRK10276 RVT-GII XerC PinE Neighborhood of RT #3 [3741759, 3747179] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #4 [4128280, 4133854] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #5 [4572999, 4576507] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 2302732-2304156 bp Ori: AID95741.1 Gene: sbcB Feature: domain Description: SbcB Location: 2302738-2304154 bp Feature: domain Description: SbcB Location: 23 0273 8-23 04154 bp Feature: gene Location: 2304337-2305500 bp Ori: AID95742.1 Feature: domain Description: dacD Location: 2304340-2305495 bp Feature: domain Description: dacD Location: 23 043 40-23 05495 bp Feature: gene Location: 2306018-2307505 bp Ori: AID95743.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2306423-2307113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 06423 -23 07113 bp Feature: gene Location: 2307587-2308060 bp Ori: AID95744.1 Feature: domain Description: PRK10016 Location: 2307590-2308049 bp Feature: domain Description: PRK10016 Location: 23 07590-23 08049 bp Feature: gene Location: 2308159-2309217 bp Ori: AID95745.1 Feature: domain Description: YccC Location: 2308165-2309203 bp Feature: domain Description: YccC Location: 23 08165-23 09203 bp Feature: gene Location: 3544374-3545639 bp Ori: AID96927.1 Feature: domain Description: umuC Location: 3544377-3545637 bp Feature: domain Description: umuC Location: 3 5443 77-3 54563 7 bp Feature: gene Location: 3545641-3546060 bp Ori: AID96928.1 Feature: domain Description: PRK10276 Location: 3545644-3546055 bp Feature: domain Description: PRK10276 Location: 3 545644-3 546055 bp Feature: gene Location: 3546140-3547627 bp Ori: AID96929.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3546545-3547235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 546545-3 54723 5 bp Feature: gene Location: 3548522-3548944 bp Ori: AID96930.1 Feature: domain Description: XerC Location: 3548558-3548903 bp Feature: domain Description: XerC Location: 3 548558-3 548903 bp Feature: gene Location: 3549022-3549531 bp Ori: AID96931.1 Feature: domain Description: PinE Location: 3549070-3549523 bp Feature: domain Description: PinE Location: 3 549070-3 549523 bp Feature: gene Location: 3741759-3743024 bp Ori: AID97123.1 Feature: domain Description: umuC Location: 3741762-3743022 bp Feature: domain Description: umuC Location: 3 741762-3 743 022 bp Feature: gene Location: 3743027-3743446 bp Ori: AID97124.1 Feature: domain Description: PRK10276 Location: 3743030-3743441 bp Feature: domain Description: PRK10276 Location: 3 743 03 0-3 743 441 bp Feature: gene Location: 3743525-3745012 bp Ori: AID97125.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3743930-3744620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 743 93 0-3 744620 bp Feature: gene Location: 3745627-3745869 bp Ori: AID97126.1 Feature: domain Description: DinI Location: 3745678-3745858 bp Feature: domain Description: DinI Location: 3 745678-3 745858 bp Feature: gene Location: 3746040-3747179 bp Ori: AID97127.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3746223-3747123 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3 746223 -3 747123 bp Feature: gene Location: 4128280-4129158 bp Ori: AID97490.1 Feature: domain Description: Phage_CI_repr Location: 4128307-4128490 bp Feature: domain Description: Phage_CI_repr Location: 41283 07-4128490 bp Feature: domain Description: Phage_CI_repr Location: 4128619-4128811 bp Feature: domain Description: Phage_CI_repr Location: 4128619-4128811 bp Feature: domain Description: Phage_CI_C Location: 4128838-4129132 bp Feature: domain Description: Phage_CI_C Location: 412883 8-412913 2 bp Feature: gene Location: 4129170-4130114 bp Feature: gene Location: 4130213-4131700 bp Ori: AID97492.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4130618-4131308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413 0618-413 13 08 bp Feature: gene Location: 4132116-4133168 bp Ori: AID97493.1 Feature: domain Description: int Location: 4132119-4133118 bp Feature: domain Description: int Location: 413 2119-413 3 118 bp Feature: gene Location: 4133291-4133854 bp Ori: AID97494.1 Feature: domain Description: YbjK Location: 4133297-4133834 bp Feature: domain Description: YbjK Location: 413 3 297-413 3 83 4 bp Feature: gene Location: 4572999-4573316 bp Ori: AID97882.1 Feature: domain Description: PRK10276 Location: 4573005-4573119 bp Feature: domain Description: PRK10276 Location: 4573 005-4573 119 bp Feature: domain Description: PRK10276 Location: 4573146-4573215 bp Feature: domain Description: PRK10276 Location: 4573 146-4573 215 bp Feature: gene Location: 4573316-4573555 bp Feature: gene Location: 4573633-4575120 bp Ori: AID97884.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4574038-4574728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457403 8-4574728 bp Feature: gene Location: 4575570-4575779 bp Feature: gene Location: 4575776-4576507 bp Ori: AID97886.1 Feature: domain Description: Laminin_G_3 Location: 4576097-4576451 bp Feature: domain Description: Laminin_G_3 Location: 4576097-4576451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), PinE (COG1961), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)