myRT

myRT report for GCA_000724665.3_ASM72466v3

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Seq: CP036542.1 Bacteroides fragilis strain DCMOUH0018B chromosome, complete genome (5302644 bp)
Overview 1 RT 1: 665166-669103 bp 2 RT 2: 3408359-3414567 bp 3 RT 3: 4921554-4930470 bp Neighborhood of RT #1 [665166, 669103] RVT-DGRs Neighborhood of RT #2 [3408359, 3414647] BioF Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Neighborhood of RT #3 [4921554, 4930472] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 665166-665546 bp Feature: gene Location: 665543-665971 bp Feature: gene Location: 665934-667121 bp Ori: QCQ48455.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 666267-666894 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 666267-666894 bp Feature: gene Location: 667454-668815 bp Feature: gene Location: 668825-669103 bp Feature: gene Location: 3408359-3409543 bp Ori: QCQ50597.1 Feature: domain Description: BioF Location: 3408398-3409505 bp Feature: domain Description: BioF Location: 3408398-3409505 bp Feature: gene Location: 3410716-3411006 bp Ori: QCQ50598.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 3410743-3410953 bp Feature: domain Description: Cas2_I_II_III Location: 341 0743-341 0953 bp Feature: gene Location: 3411000-3413270 bp Ori: QCQ50599.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3411207-3411813 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 341 1 207-341 1 81 3 bp Feature: domain Description: Cas1_I-II-III Location: 3412272-3413229 bp Feature: domain Description: Cas1 _I-II-III Location: 341 2272-341 3229 bp Feature: gene Location: 3413290-3414234 bp Ori: QCQ50600.1 Gene: cmr6 Feature: domain Description: Cmr6_III-B Location: 3413434-3414223 bp Feature: domain Description: Cmr6_III-B Location: 341 3434-341 4223 bp Feature: gene Location: 3414237-3414647 bp Ori: QCQ50601.1 Feature: domain Description: Cas_Cmr5 Location: 3414285-3414567 bp Feature: domain Description: Cas_Cmr5 Location: 341 4285-341 4567 bp Feature: gene Location: 4921554-4922468 bp Ori: QCQ51817.1 Feature: domain Description: RNase_Z Location: 4921569-4922460 bp Feature: domain Description: RNase_Z Location: 4921 569-4922460 bp Feature: gene Location: 4922592-4924385 bp Ori: QCQ51818.1 Feature: domain Description: rpsA Location: 4922670-4924278 bp Feature: domain Description: rpsA Location: 4922670-4924278 bp Feature: gene Location: 4924527-4925642 bp Ori: QCQ51819.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4924842-4925394 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4924842-4925394 bp Feature: gene Location: 4925852-4928071 bp Feature: gene Location: 4928283-4930472 bp Ori: QCQ51821.1 Feature: domain Description: GlnA3 Location: 4928355-4930470 bp Feature: domain Description: GlnA3 Location: 4928355-4930470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, BioF (COG0156), Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701), RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons
GlnA3 (COG3968)