myRT

myRT report for GCA_000725285.1_ASM72528v1

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Seq: CP007161.1 Virgibacillus sp. SK37, complete genome (3821074 bp)
Overview 1 RT 1: 596206-601918 bp 2 RT 2: 3137698-3142464 bp Neighborhood of RT #1 [596206, 601953] DEXQc_UvrD DEXQc_UvrD UvrD COG4637 COG4637 TOPRIM_OLD RVT-Retrons DUF2187 SsuE Neighborhood of RT #2 [3137698, 3142871] PTSIIB_sorb PTS_IIA_man RVT-UG2 LAGLIDADG_2 Feature: gene Location: 596206-597324 bp Ori: AIF42416.1 Feature: domain Description: DEXQc_UvrD Location: 596224-596458 bp Feature: domain Description: DEXQc_UvrD Location: 596224-596458 bp Feature: domain Description: DEXQc_UvrD Location: 596566-596764 bp Feature: domain Description: DEXQc_UvrD Location: 596566-596764 bp Feature: domain Description: UvrD Location: 597070-597259 bp Feature: domain Description: UvrD Location: 597070-597259 bp Feature: gene Location: 597553-599553 bp Ori: AIF45169.1 Feature: domain Description: COG4637 Location: 597556-597706 bp Feature: domain Description: COG4637 Location: 597556-597706 bp Feature: domain Description: COG4637 Location: 598288-598522 bp Feature: domain Description: COG4637 Location: 598288-598522 bp Feature: domain Description: TOPRIM_OLD Location: 598645-598846 bp Feature: domain Description: TOPRIM_OLD Location: 598645-598846 bp Feature: gene Location: 599790-600791 bp Ori: AIF42417.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 599910-600468 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59991 0-600468 bp Feature: gene Location: 601171-601350 bp Ori: AIF42418.1 Feature: domain Description: DUF2187 Location: 601192-601348 bp Feature: domain Description: DUF21 87 Location: 601 1 92-601 348 bp Feature: gene Location: 601402-601953 bp Ori: AIF42419.1 Feature: domain Description: SsuE Location: 601408-601918 bp Feature: domain Description: SsuE Location: 601 408-601 91 8 bp Feature: gene Location: 3137698-3138204 bp Ori: AIF44531.1 Feature: domain Description: PTSIIB_sorb Location: 3137710-3138151 bp Feature: domain Description: PTSIIB_sorb Location: 31 3771 0-31 381 51 bp Feature: gene Location: 3138293-3138712 bp Ori: AIF44532.1 Feature: domain Description: PTS_IIA_man Location: 3138320-3138662 bp Feature: domain Description: PTS_IIA_man Location: 31 38320-31 38662 bp Feature: gene Location: 3139216-3140607 bp Ori: AIF44533.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3139423-3140254 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 31 39423-31 40254 bp Feature: gene Location: 3141293-3141685 bp Feature: gene Location: 3141954-3142871 bp Ori: AIF45565.1 Feature: domain Description: LAGLIDADG_2 Location: 3141987-3142464 bp Feature: domain Description: LAGLIDADG_2 Location: 31 41 987-31 42464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), COG4637 (Predicted ATPase ), TOPRIM_OLD (cd01026), RVT-Retrons, DUF2187 (pfam09953), SsuE (COG0431), PTSIIB_sorb (pfam03830), PTS_IIA_man (cl00025), RVT-UG2
LAGLIDADG_2 (pfam03161)