myRT

myRT report for GCA_000733255.1_ASM73325v1

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Seq: CP006799.1 Klebsiella pneumoniae subsp. pneumoniae PittNDM01 plasmid1, complete sequence (283371 bp)
Overview 1 RT 1: 110169-118453 bp 2 RT 2: 256441-261454 bp Neighborhood of RT #1 [110169, 118569] umuC PRK10276 RVT-GII cas7_csf2 DinG PRK08074 DinG Neighborhood of RT #2 [256441, 261454] INT_Cre_C RVT-GII HHA Feature: gene Location: 110169-111440 bp Ori: AIG86312.1 Feature: domain Description: umuC Location: 110172-111432 bp Feature: domain Description: umuC Location: 1 1 01 72-1 1 1 432 bp Feature: gene Location: 111440-111862 bp Ori: AIG86313.1 Feature: domain Description: PRK10276 Location: 111446-111848 bp Feature: domain Description: PRK1 0276 Location: 1 1 1 446-1 1 1 848 bp Feature: gene Location: 111948-113432 bp Ori: AIG86442.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112350-113040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 2350-1 1 3040 bp Feature: gene Location: 114958-115749 bp Ori: AIG86443.1 Feature: domain Description: cas7_csf2 Location: 115279-115693 bp Feature: domain Description: cas7_csf2 Location: 1 1 5279-1 1 5693 bp Feature: gene Location: 116695-118569 bp Ori: AIG86444.1 Feature: domain Description: DinG Location: 116728-117229 bp Feature: domain Description: DinG Location: 1 1 6728-1 1 7229 bp Feature: domain Description: PRK08074 Location: 117232-117421 bp Feature: domain Description: PRK08074 Location: 1 1 7232-1 1 7421 bp Feature: domain Description: DinG Location: 117748-118453 bp Feature: domain Description: DinG Location: 1 1 7748-1 1 8453 bp Feature: gene Location: 256441-256758 bp Feature: gene Location: 256824-257960 bp Ori: AIG86578.1 Feature: domain Description: INT_Cre_C Location: 257247-257901 bp Feature: domain Description: INT_Cre_C Location: 257247-257901 bp Feature: gene Location: 258046-259530 bp Ori: AIG86579.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258448-259138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258448-2591 38 bp Feature: gene Location: 260047-260301 bp Ori: AIG86329.1 Feature: domain Description: HHA Location: 260098-260281 bp Feature: domain Description: HHA Location: 260098-260281 bp Feature: gene Location: 260387-261454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, cas7_csf2 (TIGR03115), DinG (COG1199), PRK08074 (bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated), INT_Cre_C (cd00799), HHA (pfam05321)

Seq: CP006801.1 Klebsiella pneumoniae subsp. pneumoniae PittNDM01 plasmid3, complete sequence (70814 bp)
Overview 1 RT 1: 16336-22277 bp Neighborhood of RT #1 [16336, 22277] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 16336-17607 bp Ori: AIG86700.1 Feature: domain Description: umuC Location: 16339-17599 bp Feature: domain Description: umuC Location: 16339-17599 bp Feature: gene Location: 17607-18038 bp Ori: AIG86701.1 Feature: domain Description: PRK10276 Location: 17658-18021 bp Feature: domain Description: PRK102 76 Location: 17658-1802 1 bp Feature: gene Location: 18447-19931 bp Ori: AIG86724.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18849-19539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18849-19539 bp Feature: gene Location: 20401-21366 bp Ori: AIG86725.1 Feature: domain Description: ArdC Location: 20527-21361 bp Feature: domain Description: ArdC Location: 2 052 7-2 1361 bp Feature: gene Location: 21846-22277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: CP006798.1 Klebsiella pneumoniae subsp. pneumoniae PittNDM01, complete genome (5348284 bp)
Overview 1 RT 1: 56599-63070 bp 2 RT 2: 253859-259253 bp 3 RT 3: 1498468-1502700 bp 4 RT 4: 4340614-4348030 bp Neighborhood of RT #1 [56599, 63084] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [253859, 259255] RVT-GII PRK10276 umuC Neighborhood of RT #3 [1498468, 1502756] PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #4 [4340614, 4348030] FimC FimD RVT-UG4 Feature: gene Location: 56599-58023 bp Ori: AIG81394.1 Gene: sbcB Feature: domain Description: SbcB Location: 56605-58021 bp Feature: domain Description: SbcB Location: 56605-58021 bp Feature: gene Location: 58198-59367 bp Ori: AIG81395.1 Feature: domain Description: dacD Location: 58207-59362 bp Feature: domain Description: dacD Location: 58207-593 62 bp Feature: gene Location: 59888-61372 bp Ori: AIG85890.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60290-60980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60290-60980 bp Feature: gene Location: 61454-61927 bp Ori: AIG81396.1 Feature: domain Description: PRK10016 Location: 61457-61916 bp Feature: domain Description: PRK10016 Location: 61457-61916 bp Feature: gene Location: 62026-63084 bp Ori: AIG81397.1 Feature: domain Description: YccC Location: 62032-63070 bp Feature: domain Description: YccC Location: 6203 2-63 070 bp Feature: gene Location: 253859-254593 bp Feature: gene Location: 255480-255599 bp Feature: gene Location: 256005-257489 bp Ori: AIG85953.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256407-257097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256407-257097 bp Feature: gene Location: 257568-257987 bp Ori: AIG81516.1 Feature: domain Description: PRK10276 Location: 257571-257982 bp Feature: domain Description: PRK10276 Location: 257571-257982 bp Feature: gene Location: 257990-259255 bp Ori: AIG81517.1 Feature: domain Description: umuC Location: 257993-259253 bp Feature: domain Description: umuC Location: 257993 -259253 bp Feature: gene Location: 1498468-1498785 bp Ori: AIG86076.1 Feature: domain Description: PRK10276 Location: 1498474-1498591 bp Feature: domain Description: PRK10276 Location: 1498474-1498591 bp Feature: gene Location: 1498785-1499024 bp Feature: gene Location: 1499102-1500586 bp Ori: AIG86078.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1499504-1500194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1499504-1500194 bp Feature: gene Location: 1501204-1501446 bp Ori: AIG82581.1 Feature: domain Description: DinI Location: 1501255-1501435 bp Feature: domain Description: DinI Location: 1501255-150143 5 bp Feature: gene Location: 1501617-1502756 bp Ori: AIG82582.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1501800-1502700 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1501800-1502700 bp Feature: gene Location: 4340614-4341378 bp Ori: AIG85011.1 Feature: domain Description: FimC Location: 4340659-4341361 bp Feature: domain Description: FimC Location: 43 40659-43 413 61 bp Feature: gene Location: 4341425-4344019 bp Ori: AIG86231.1 Feature: domain Description: FimD Location: 4341467-4344008 bp Feature: domain Description: FimD Location: 43 41467-43 44008 bp Feature: gene Location: 4344016-4346097 bp Ori: AIG86232.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4344427-4344871 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 43 44427-43 44871 bp Feature: gene Location: 4346136-4346285 bp Feature: gene Location: 4347686-4348030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), FimC (COG3121)
FimD (COG3188), RVT-UG4

Seq: CP006800.1 Klebsiella pneumoniae subsp. pneumoniae PittNDM01 plasmid2, complete sequence (103694 bp)
Overview 1 RT 1: 17316-22307 bp Neighborhood of RT #1 [17316, 22312] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 17316-17741 bp Ori: AIG86630.1 Feature: domain Description: Antirestrict Location: 17451-17739 bp Feature: domain Description: Antirestrict Location: 174 51-17739 bp Feature: gene Location: 18262-18492 bp Feature: gene Location: 18726-20210 bp Ori: AIG86632.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19128-19818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19128-19818 bp Feature: gene Location: 20616-21041 bp Ori: AIG86601.1 Feature: domain Description: PRK10276 Location: 20619-21027 bp Feature: domain Description: PRK10276 Location: 20619-21027 bp Feature: gene Location: 21041-22312 bp Ori: AIG86602.1 Feature: domain Description: umuC Location: 21044-22307 bp Feature: domain Description: umuC Location: 2104 4 -22307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)