myRT

myRT report for GCA_000737325.2_ASM73732v2

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Seq: CP011125.1 Sandaracinus amylolyticus strain DSM 53668, complete genome (10327335 bp)
Overview 1 RT 1: 165255-175901 bp 2 RT 2: 1459302-1465568 bp 3 RT 3: 2233199-2239531 bp 4 RT 4: 4485336-4494855 bp 5 RT 5: 6478161-6484160 bp 6 RT 6: 7364646-7369447 bp 7 RT 7: 8287329-8294848 bp 8 RT 8: 8584608-8592578 bp 9 RT 9: 8766631-8771523 bp 10 RT 10: 9084212-9091753 bp 11 RT 11: 9733521-9740158 bp 12 RT 12: 10313123-10318179 bp Neighborhood of RT #1 [165255, 175901] Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE YfmG vWA_ywmD_type Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE Cu-binding_MopE RVT-GII GIIM Peptidase_S15 Neighborhood of RT #2 [1459302, 1465568] RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 RCC1_2 SpoU RVT-GII GIIM ArsC_like Neighborhood of RT #3 [2233199, 2239531] STKc_PknB_like Kelch RVT-GII GIIM FabA_FabZ Neighborhood of RT #4 [4485336, 4494855] HEAT_2 HEAT_2 RVT-Retrons CDKN3-like ADP_ribosyl_GH Neighborhood of RT #5 [6478161, 6484228] myxo_disulf_rpt myxo_disulf_rpt myxo_disulf_rpt myxo_disulf_rpt Fibro_Slime myxo_disulf_rpt RVT-GII GIIM RhaT Neighborhood of RT #6 [7364646, 7369447] RVT-Retrons Neighborhood of RT #7 [8287329, 8294848] IstB_IS21 COG4584 RVT-GII Neighborhood of RT #8 [8584608, 8592616] Na_H_Exchanger PldB RVT-GII GIIM MFS_spinster_like Neighborhood of RT #9 [8766631, 8771552] MFS_MucK PDC_hydrolase RVT-Retrons RpoE Neighborhood of RT #10 [9084212, 9092028] RfbX moaC RVT-GII GIIM HTH_LUXR DUF3552 HEAT_2 HEAT_2 Neighborhood of RT #11 [9733521, 9740158] gyrB XdhB RVT-GII GIIM Neighborhood of RT #12 [10313123, 10318214] SgaA_N_like RVT-GII GIIM PaaI TsaA Feature: gene Location: 165255-167651 bp Ori: AKF02990.1 Feature: domain Description: Cu-binding_MopE Location: 165462-165516 bp Feature: domain Description: Cu-binding_MopE Location: 1 65462-1 6551 6 bp Feature: domain Description: Cu-binding_MopE Location: 165711-165753 bp Feature: domain Description: Cu-binding_MopE Location: 1 6571 1 -1 65753 bp Feature: domain Description: Cu-binding_MopE Location: 165939-165990 bp Feature: domain Description: Cu-binding_MopE Location: 1 65939-1 65990 bp Feature: domain Description: Cu-binding_MopE Location: 166101-166152 bp Feature: domain Description: Cu-binding_MopE Location: 1 661 01 -1 661 52 bp Feature: domain Description: Cu-binding_MopE Location: 166266-166314 bp Feature: domain Description: Cu-binding_MopE Location: 1 66266-1 6631 4 bp Feature: domain Description: Cu-binding_MopE Location: 166425-166476 bp Feature: domain Description: Cu-binding_MopE Location: 1 66425-1 66476 bp Feature: domain Description: Cu-binding_MopE Location: 166659-166707 bp Feature: domain Description: Cu-binding_MopE Location: 1 66659-1 66707 bp Feature: domain Description: Cu-binding_MopE Location: 166818-166875 bp Feature: domain Description: Cu-binding_MopE Location: 1 6681 8-1 66875 bp Feature: domain Description: Cu-binding_MopE Location: 167001-167055 bp Feature: domain Description: Cu-binding_MopE Location: 1 67001 -1 67055 bp Feature: domain Description: YfmG Location: 167190-167637 bp Feature: domain Description: YfmG Location: 1 671 90-1 67637 bp Feature: gene Location: 167657-170908 bp Ori: AKF02991.1 Feature: domain Description: vWA_ywmD_type Location: 167708-168389 bp Feature: domain Description: vWA_ywmD_type Location: 1 67708-1 68389 bp Feature: domain Description: Cu-binding_MopE Location: 168470-168524 bp Feature: domain Description: Cu-binding_MopE Location: 1 68470-1 68524 bp Feature: domain Description: Cu-binding_MopE Location: 168593-168641 bp Feature: domain Description: Cu-binding_MopE Location: 1 68593-1 68641 bp Feature: domain Description: Cu-binding_MopE Location: 168677-168731 bp Feature: domain Description: Cu-binding_MopE Location: 1 68677-1 68731 bp Feature: domain Description: Cu-binding_MopE Location: 168758-168809 bp Feature: domain Description: Cu-binding_MopE Location: 1 68758-1 68809 bp Feature: domain Description: Cu-binding_MopE Location: 168926-168974 bp Feature: domain Description: Cu-binding_MopE Location: 1 68926-1 68974 bp Feature: domain Description: Cu-binding_MopE Location: 169082-169130 bp Feature: domain Description: Cu-binding_MopE Location: 1 69082-1 691 30 bp Feature: domain Description: Cu-binding_MopE Location: 169244-169292 bp Feature: domain Description: Cu-binding_MopE Location: 1 69244-1 69292 bp Feature: domain Description: Cu-binding_MopE Location: 169412-169457 bp Feature: domain Description: Cu-binding_MopE Location: 1 6941 2-1 69457 bp Feature: domain Description: Cu-binding_MopE Location: 169571-169619 bp Feature: domain Description: Cu-binding_MopE Location: 1 69571 -1 6961 9 bp Feature: domain Description: Cu-binding_MopE Location: 169736-169784 bp Feature: domain Description: Cu-binding_MopE Location: 1 69736-1 69784 bp Feature: domain Description: Cu-binding_MopE Location: 169895-169943 bp Feature: domain Description: Cu-binding_MopE Location: 1 69895-1 69943 bp Feature: gene Location: 170995-173061 bp Ori: AKF02992.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172015-172648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7201 5-1 72648 bp Feature: domain Description: GIIM Note: maturase Location: 172738-172942 bp Feature: domain Description: GIIM Note: maturase Location: 1 72738-1 72942 bp Feature: gene Location: 173176-174558 bp Ori: AKF02993.1 Feature: domain Description: Peptidase_S15 Location: 173410-173899 bp Feature: domain Description: Peptidase_S1 5 Location: 1 7341 0-1 73899 bp Feature: gene Location: 174600-175901 bp Feature: gene Location: 1459302-1461449 bp Ori: AKF04091.1 Feature: domain Description: RCC1_2 Location: 1459527-1459560 bp Feature: domain Description: RCC1 _2 Location: 1 459527-1 459560 bp Feature: domain Description: RCC1_2 Location: 1459749-1459824 bp Feature: domain Description: RCC1 _2 Location: 1 459749-1 459824 bp Feature: domain Description: RCC1_2 Location: 1459914-1459956 bp Feature: domain Description: RCC1 _2 Location: 1 45991 4-1 459956 bp Feature: domain Description: RCC1_2 Location: 1460460-1460547 bp Feature: domain Description: RCC1 _2 Location: 1 460460-1 460547 bp Feature: domain Description: RCC1_2 Location: 1460610-1460697 bp Feature: domain Description: RCC1 _2 Location: 1 46061 0-1 460697 bp Feature: domain Description: RCC1_2 Location: 1460760-1460847 bp Feature: domain Description: RCC1 _2 Location: 1 460760-1 460847 bp Feature: domain Description: RCC1_2 Location: 1461063-1461120 bp Feature: domain Description: RCC1 _2 Location: 1 461 063-1 461 1 20 bp Feature: gene Location: 1461501-1462316 bp Ori: AKF04092.1 Feature: domain Description: SpoU Location: 1461579-1462305 bp Feature: domain Description: SpoU Location: 1 461 579-1 462305 bp Feature: gene Location: 1462380-1464320 bp Ori: AKF04093.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463277-1463910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 463277-1 46391 0 bp Feature: domain Description: GIIM Note: maturase Location: 1464000-1464201 bp Feature: domain Description: GIIM Note: maturase Location: 1 464000-1 464201 bp Feature: gene Location: 1464435-1464797 bp Ori: AKF04094.1 Feature: domain Description: ArsC_like Location: 1464453-1464774 bp Feature: domain Description: ArsC_like Location: 1 464453-1 464774 bp Feature: gene Location: 1464804-1465568 bp Feature: gene Location: 2233199-2234860 bp Ori: AKF04772.1 Feature: domain Description: STKc_PknB_like Location: 2233244-2234006 bp Feature: domain Description: STKc_PknB_like Location: 2233244-2234006 bp Feature: gene Location: 2234907-2236682 bp Ori: AKF04773.1 Feature: domain Description: Kelch Location: 2235477-2235882 bp Feature: domain Description: Kelch Location: 2235477-2235882 bp Feature: gene Location: 2236702-2238642 bp Ori: AKF04774.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2237596-2238229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2237596-2238229 bp Feature: domain Description: GIIM Note: maturase Location: 2238319-2238523 bp Feature: domain Description: GIIM Note: maturase Location: 223831 9-2238523 bp Feature: gene Location: 2238757-2239116 bp Ori: AKF04775.1 Feature: domain Description: FabA_FabZ Location: 2238790-2239108 bp Feature: domain Description: FabA_FabZ Location: 2238790-22391 08 bp Feature: gene Location: 2239121-2239531 bp Feature: gene Location: 4485336-4487705 bp Ori: AKF06748.1 Feature: domain Description: HEAT_2 Location: 4485426-4485546 bp Feature: domain Description: HEAT_2 Location: 4485426-4485546 bp Feature: domain Description: HEAT_2 Location: 4485573-4485696 bp Feature: domain Description: HEAT_2 Location: 4485573-4485696 bp Feature: gene Location: 4487702-4489438 bp Feature: gene Location: 4489731-4491137 bp Ori: AKF06750.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4490280-4490892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4490280-4490892 bp Feature: gene Location: 4491183-4492877 bp Ori: AKF06751.1 Feature: domain Description: CDKN3-like Location: 4491312-4491768 bp Feature: domain Description: CDKN3-like Location: 4491 31 2-4491 768 bp Feature: domain Description: ADP_ribosyl_GH Location: 4491966-4492818 bp Feature: domain Description: ADP_ribosyl_GH Location: 4491 966-449281 8 bp Feature: gene Location: 4493281-4494855 bp Feature: gene Location: 6478161-6479693 bp Ori: AKF08418.1 Feature: domain Description: myxo_disulf_rpt Location: 6478296-6478407 bp Feature: domain Description: myxo_disulf_rpt Location: 6478296-6478407 bp Feature: domain Description: myxo_disulf_rpt Location: 6478437-6478557 bp Feature: domain Description: myxo_disulf_rpt Location: 6478437-6478557 bp Feature: domain Description: myxo_disulf_rpt Location: 6478581-6478659 bp Feature: domain Description: myxo_disulf_rpt Location: 6478581 -6478659 bp Feature: domain Description: myxo_disulf_rpt Location: 6478701-6478809 bp Feature: domain Description: myxo_disulf_rpt Location: 6478701 -6478809 bp Feature: domain Description: Fibro_Slime Location: 6479253-6479550 bp Feature: domain Description: Fibro_Slime Location: 6479253-6479550 bp Feature: domain Description: myxo_disulf_rpt Location: 6479589-6479676 bp Feature: domain Description: myxo_disulf_rpt Location: 6479589-6479676 bp Feature: gene Location: 6479694-6480191 bp Feature: gene Location: 6480306-6482396 bp Ori: AKF08420.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6481350-6481983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6481 350-6481 983 bp Feature: domain Description: GIIM Note: maturase Location: 6482073-6482277 bp Feature: domain Description: GIIM Note: maturase Location: 6482073-6482277 bp Feature: gene Location: 6482364-6482873 bp Feature: gene Location: 6483311-6484228 bp Ori: AKF08422.1 Feature: domain Description: RhaT Location: 6483332-6484160 bp Feature: domain Description: RhaT Location: 6483332-64841 60 bp Feature: gene Location: 7364646-7366337 bp Feature: gene Location: 7366343-7366804 bp Feature: gene Location: 7366801-7368636 bp Ori: AKF09218.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7367791-7368406 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7367791 -7368406 bp Feature: gene Location: 7368644-7368946 bp Feature: gene Location: 7369031-7369447 bp Feature: gene Location: 8287329-8288144 bp Ori: AKF10008.1 Feature: domain Description: IstB_IS21 Location: 8287515-8288025 bp Feature: domain Description: IstB_IS21 Location: 828751 5-8288025 bp Feature: gene Location: 8288141-8289724 bp Ori: AKF10009.1 Feature: domain Description: COG4584 Location: 8288213-8289083 bp Feature: domain Description: COG4584 Location: 828821 3-8289083 bp Feature: gene Location: 8291189-8291470 bp Ori: AKF10010.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8291195-8291399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8291 1 95-8291 399 bp Feature: gene Location: 8292981-8293184 bp Feature: gene Location: 8294723-8294848 bp Feature: gene Location: 8584608-8586386 bp Ori: AKF10238.1 Feature: domain Description: Na_H_Exchanger Location: 8585193-8586201 bp Feature: domain Description: Na_H_Exchanger Location: 85851 93-8586201 bp Feature: gene Location: 8586473-8587402 bp Ori: AKF10239.1 Feature: domain Description: PldB Location: 8586500-8587397 bp Feature: domain Description: PldB Location: 8586500-8587397 bp Feature: gene Location: 8587517-8589487 bp Ori: AKF10240.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8588441-8589074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8588441 -8589074 bp Feature: domain Description: GIIM Note: maturase Location: 8589164-8589368 bp Feature: domain Description: GIIM Note: maturase Location: 85891 64-8589368 bp Feature: gene Location: 8589739-8591262 bp Feature: gene Location: 8591285-8592616 bp Ori: AKF10242.1 Feature: domain Description: MFS_spinster_like Location: 8591351-8592578 bp Feature: domain Description: MFS_spinster_like Location: 8591 351 -8592578 bp Feature: gene Location: 8766631-8767599 bp Ori: AKF10379.1 Feature: domain Description: MFS_MucK Location: 8766685-8767585 bp Feature: domain Description: MFS_MucK Location: 8766685-8767585 bp Feature: gene Location: 8767589-8768410 bp Ori: AKF10380.1 Feature: domain Description: PDC_hydrolase Location: 8767616-8768387 bp Feature: domain Description: PDC_hydrolase Location: 876761 6-8768387 bp Feature: gene Location: 8768600-8769970 bp Ori: AKF10381.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8769113-8769737 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87691 1 3-8769737 bp Feature: gene Location: 8769967-8770992 bp Feature: gene Location: 8771130-8771552 bp Ori: AKF10383.1 Feature: domain Description: RpoE Location: 8771136-8771523 bp Feature: domain Description: RpoE Location: 8771 1 36-8771 523 bp Feature: gene Location: 9084212-9085744 bp Ori: AKF10661.1 Feature: domain Description: RfbX Location: 9084254-9085676 bp Feature: domain Description: RfbX Location: 9084254-9085676 bp Feature: gene Location: 9085745-9086224 bp Ori: AKF10662.1 Feature: domain Description: moaC Location: 9085754-9086219 bp Feature: domain Description: moaC Location: 9085754-908621 9 bp Feature: gene Location: 9086339-9088282 bp Ori: AKF10663.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9087236-9087869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9087236-9087869 bp Feature: domain Description: GIIM Note: maturase Location: 9087959-9088163 bp Feature: domain Description: GIIM Note: maturase Location: 9087959-90881 63 bp Feature: gene Location: 9088397-9088999 bp Ori: AKF10664.1 Feature: domain Description: HTH_LUXR Location: 9088793-9088955 bp Feature: domain Description: HTH_LUXR Location: 9088793-9088955 bp Feature: gene Location: 9089176-9092028 bp Ori: AKF10665.1 Feature: domain Description: DUF3552 Location: 9089602-9089794 bp Feature: domain Description: DUF3552 Location: 9089602-9089794 bp Feature: domain Description: HEAT_2 Location: 9091360-9091486 bp Feature: domain Description: HEAT_2 Location: 9091 360-9091 486 bp Feature: domain Description: HEAT_2 Location: 9091531-9091753 bp Feature: domain Description: HEAT_2 Location: 9091 531 -9091 753 bp Feature: gene Location: 9733521-9734513 bp Ori: AKF11251.1 Feature: domain Description: gyrB Location: 9733530-9734337 bp Feature: domain Description: gyrB Location: 9733530-9734337 bp Feature: gene Location: 9734526-9736931 bp Ori: AKF11252.1 Feature: domain Description: XdhB Location: 9734574-9736893 bp Feature: domain Description: XdhB Location: 9734574-9736893 bp Feature: gene Location: 9737046-9738989 bp Ori: AKF11253.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9737943-9738576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9737943-9738576 bp Feature: domain Description: GIIM Note: maturase Location: 9738666-9738870 bp Feature: domain Description: GIIM Note: maturase Location: 9738666-9738870 bp Feature: gene Location: 9739053-9739514 bp Feature: gene Location: 9739511-9740158 bp Feature: gene Location: 10313123-10313485 bp Ori: AKF11800.1 Feature: domain Description: SgaA_N_like Location: 10313141-10313471 bp Feature: domain Description: SgaA_N_like Location: 1 031 31 41 -1 031 3471 bp Feature: gene Location: 10313499-10313933 bp Feature: gene Location: 10314874-10317150 bp Ori: AKF11802.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10316104-10316737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 61 04-1 031 6737 bp Feature: domain Description: GIIM Note: maturase Location: 10316827-10317031 bp Feature: domain Description: GIIM Note: maturase Location: 1 031 6827-1 031 7031 bp Feature: gene Location: 10317265-10317654 bp Ori: AKF11803.1 Feature: domain Description: PaaI Location: 10317283-10317637 bp Feature: domain Description: PaaI Location: 1 031 7283-1 031 7637 bp Feature: gene Location: 10317651-10318214 bp Ori: AKF11804.1 Feature: domain Description: TsaA Location: 10317720-10318179 bp Feature: domain Description: TsaA Location: 1 031 7720-1 031 81 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cu-binding_MopE (pfam11617), YfmG (COG1262), vWA_ywmD_type (cd01456), RVT-GII, GIIM (pfam08388), Peptidase_S15 (pfam02129), RCC1_2 (pfam13540), SpoU (COG0566), ArsC_like (cd03036), STKc_PknB_like (cd14014)
Kelch (smart00612), FabA_FabZ (cd00493), HEAT_2 (pfam13646), RVT-Retrons, CDKN3-like (cd14505), ADP_ribosyl_GH (pfam03747), myxo_disulf_rpt (TIGR02232), Fibro_Slime (TIGR02148), RhaT (TIGR00776), IstB_IS21 (pfam01695)
COG4584 (Transposase ), Na_H_Exchanger (pfam00999), PldB (COG2267), MFS_spinster_like (cd17328), MFS_MucK (cd17371), PDC_hydrolase (cd01311), RpoE (COG3343), RfbX (COG2244), moaC (TIGR00581), HTH_LUXR (smart00421)
DUF3552 (pfam12072), gyrB (TIGR01059), XdhB (COG4631), SgaA_N_like (cd07247), PaaI (COG2050), TsaA (COG1720)