myRT

myRT report for GCA_000742955.1_ASM74295v1

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Seq: CP008817.1 Ochrobactrum anthropi strain OAB plasmid 1, complete sequence (155838 bp)
Overview 1 RT 1: 103956-107677 bp 2 RT 2: 114711-120166 bp Neighborhood of RT #1 [103956, 107677] HTH_32 RVT-GII KOG4768 Tra5 Neighborhood of RT #2 [114711, 120166] PBP1_methylthioribose_binding_like Tra5 RVT-GII KOG4768 Feature: gene Location: 103956-104426 bp Ori: AIK40986.1 Feature: domain Description: HTH_32 Location: 104061-104283 bp Feature: domain Description: HTH_32 Location: 1 04061 -1 04283 bp Feature: gene Location: 104685-104951 bp Feature: gene Location: 105045-106571 bp Ori: AIK40916.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105318-106050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0531 8-1 06050 bp Feature: domain Description: KOG4768 Location: 106209-106326 bp Feature: domain Description: KOG4768 Location: 1 06209-1 06326 bp Feature: gene Location: 106735-107187 bp Ori: AIK40960.1 Feature: domain Description: Tra5 Location: 106738-107110 bp Feature: domain Description: Tra5 Location: 1 06738-1 071 1 0 bp Feature: gene Location: 107426-107677 bp Feature: gene Location: 114711-115754 bp Ori: AIK41006.1 Feature: domain Description: PBP1_methylthioribose_binding_like Location: 114804-115596 bp Feature: domain Description: PBP1 _methylthioribose_binding_like Location: 1 1 4804-1 1 5596 bp Feature: gene Location: 116908-117360 bp Ori: AIK40881.1 Feature: domain Description: Tra5 Location: 116911-117283 bp Feature: domain Description: Tra5 Location: 1 1 691 1 -1 1 7283 bp Feature: gene Location: 117524-119050 bp Ori: AIK40895.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117797-118529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7797-1 1 8529 bp Feature: domain Description: KOG4768 Location: 118688-118805 bp Feature: domain Description: KOG4768 Location: 1 1 8688-1 1 8805 bp Feature: gene Location: 119144-119410 bp Feature: gene Location: 119600-120166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Tra5 (COG2801), PBP1_methylthioribose_binding_like

Seq: CP008820.1 Ochrobactrum anthropi strain OAB chromosome 1, complete sequence (2708454 bp)
Overview 1 RT 1: 744859-750634 bp 2 RT 2: 909423-915695 bp 3 RT 3: 2284715-2288221 bp Neighborhood of RT #1 [744859, 750634] HTH_Tnp_1 RVT-UG12 Neighborhood of RT #2 [909423, 915736] RVT-UG3 RVT-UG8 SR_Res_par HTH_7 COG3448 Neighborhood of RT #3 [2284715, 2288256] HTH_Tnp_1 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 744859-745419 bp Feature: gene Location: 746543-746809 bp Ori: AIK43878.1 Feature: domain Description: HTH_Tnp_1 Location: 746549-746756 bp Feature: domain Description: HTH_Tnp_1 Location: 746549-746756 bp Feature: gene Location: 746942-748615 bp Ori: AIK43607.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 747320-747758 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 74732 0-747758 bp Feature: gene Location: 749290-750135 bp Feature: gene Location: 750302-750634 bp Feature: gene Location: 909423-910139 bp Feature: gene Location: 910151-910480 bp Feature: gene Location: 910620-911870 bp Ori: AIK43599.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 910902-911388 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 910902 -911388 bp Feature: gene Location: 911863-913884 bp Ori: AIK44277.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 912394-912838 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 912 394-912 838 bp Feature: gene Location: 914226-914843 bp Ori: AIK44716.1 Feature: domain Description: SR_Res_par Location: 914238-914670 bp Feature: domain Description: SR_Res_par Location: 9142 38-914670 bp Feature: domain Description: HTH_7 Location: 914706-914811 bp Feature: domain Description: HTH_7 Location: 914706-914811 bp Feature: gene Location: 914987-915736 bp Ori: AIK44322.1 Feature: domain Description: COG3448 Location: 915488-915695 bp Feature: domain Description: COG3448 Location: 915488-915695 bp Feature: gene Location: 2284715-2284954 bp Feature: gene Location: 2284978-2285241 bp Ori: AIK44203.1 Feature: domain Description: HTH_Tnp_1 Location: 2284984-2285191 bp Feature: domain Description: HTH_Tnp_1 Location: 2 2 84984-2 2 85191 bp Feature: gene Location: 2285402-2286931 bp Ori: AIK44380.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2285675-2286410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 85675-2 2 86410 bp Feature: domain Description: GIIM Note: maturase Location: 2286482-2286710 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 86482 -2 2 86710 bp Feature: gene Location: 2287547-2287948 bp Ori: AIK44123.1 Feature: domain Description: PHA02517 Location: 2287652-2287916 bp Feature: domain Description: PHA02 517 Location: 2 2 87652 -2 2 87916 bp Feature: gene Location: 2287945-2288256 bp Ori: AIK44939.1 Feature: domain Description: InsE Location: 2287948-2288221 bp Feature: domain Description: InsE Location: 2 2 87948-2 2 882 2 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-UG12, RVT-UG3, RVT-UG8, SR_Res_par (cd03767), HTH_7 (pfam02796), COG3448 (CBS-domain-containing membrane protein ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)
InsE (COG2963)