myRT

myRT report for GCA_000747545.1_ASM74754v1

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Seq: CP007607.1 Bacillus thuringiensis serovar kurstaki str. YBT-1520, complete genome (5607837 bp)
Overview 1 RT 1: 28008-31746 bp 2 RT 2: 120768-125235 bp 3 RT 3: 371185-376254 bp 4 RT 4: 494630-500419 bp 5 RT 5: 760236-765446 bp 6 RT 6: 937472-945622 bp 7 RT 7: 1981378-1989419 bp 8 RT 8: 2184802-2191150 bp 9 RT 9: 2360507-2365343 bp 10 RT 10: 2700891-2707100 bp 11 RT 11: 3342361-3348661 bp 12 RT 12: 3706348-3712542 bp 13 RT 13: 3812350-3816507 bp 14 RT 14: 4890524-4894524 bp 15 RT 15: 5277807-5283096 bp Neighborhood of RT #1 [28008, 31746] CwlA SH3b SH3b Holin_SPP1 RVT-GII GIIM XhlA Neighborhood of RT #2 [120768, 125327] DppB RVT-GII GIIM DDE_Tnp_1 DppB Neighborhood of RT #3 [371185, 376265] SrmB DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 SrmB RRM_BsYxiN_like Neighborhood of RT #4 [494630, 500445] uvsE DDE_Tnp_1 RVT-GII GIIM cls Neighborhood of RT #5 [760236, 765446] CBM_4_9 CBM_4_9 DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #6 [937472, 945624] Smc PhageMin_Tail RVT-GII RVT-GII HNHc tape_meas_TP901 Sipho_tail Neighborhood of RT #7 [1981378, 1989442] rnc SMC_prok_B RVT-GII HNHc SMC_prok_B PRK10416 Neighborhood of RT #8 [2184802, 2191215] CdnL FadH RVT-GII HNHc OYE_like_FMN GltS_FMN Neighborhood of RT #9 [2360507, 2365486] DDE_Tnp_1 RVT-GII GIIM COG4584 Neighborhood of RT #10 [2700891, 2707264] OmpR RVT-GII HNHc HATPase_BceS-YxdK-YvcQ-like Uup Uup Neighborhood of RT #11 [3342361, 3348661] MgtE RimL RVT-GII Intron_maturas2 HNHc Lysozyme_like Neighborhood of RT #12 [3706348, 3712571] BclA_C EstA RVT-GII Intron_maturas2 HNHc NhoA Neighborhood of RT #13 [3812350, 3816507] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #14 [4890524, 4894524] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #15 [5277807, 5283098] VOC_Bs_YwkD_like RVT-GII GIIM DDE_Tnp_1 NupC Feature: gene Location: 28008-28940 bp Ori: AIM28435.1 Feature: domain Description: CwlA Location: 28017-28509 bp Feature: domain Description: CwlA Location: 2801 7-28509 bp Feature: domain Description: SH3b Location: 28545-28662 bp Feature: domain Description: SH3b Location: 28545-28662 bp Feature: domain Description: SH3b Location: 28770-28929 bp Feature: domain Description: SH3b Location: 28770-28929 bp Feature: gene Location: 28958-29188 bp Ori: AIM28436.1 Feature: domain Description: Holin_SPP1 Location: 28970-29174 bp Feature: domain Description: Holin_SPP1 Location: 28970-291 74 bp Feature: gene Location: 29287-30561 bp Ori: AIM28437.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29488-30103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29488-301 03 bp Feature: domain Description: GIIM Note: maturase Location: 30163-30370 bp Feature: domain Description: GIIM Note: maturase Location: 301 63-30370 bp Feature: gene Location: 31087-31329 bp Ori: AIM28438.1 Feature: domain Description: XhlA Location: 31138-31306 bp Feature: domain Description: XhlA Location: 31 1 38-31 306 bp Feature: gene Location: 31369-31746 bp Feature: gene Location: 120768-121103 bp Ori: AIM28539.1 Feature: domain Description: DppB Location: 120771-121098 bp Feature: domain Description: DppB Location: 1 20771 -1 21 098 bp Feature: gene Location: 121266-121577 bp Feature: gene Location: 121802-123109 bp Ori: AIM28541.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122087-122726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 22087-1 22726 bp Feature: domain Description: GIIM Note: maturase Location: 122801-123026 bp Feature: domain Description: GIIM Note: maturase Location: 1 22801 -1 23026 bp Feature: gene Location: 123614-124672 bp Ori: AIM28542.1 Feature: domain Description: DDE_Tnp_1 Location: 123971-124658 bp Feature: domain Description: DDE_Tnp_1 Location: 1 23971 -1 24658 bp Feature: gene Location: 124650-125327 bp Ori: AIM28543.1 Feature: domain Description: DppB Location: 124653-125235 bp Feature: domain Description: DppB Location: 1 24653-1 25235 bp Feature: gene Location: 371185-371613 bp Ori: AIM28778.1 Feature: domain Description: SrmB Location: 371191-371503 bp Feature: domain Description: SrmB Location: 371 1 91 -371 503 bp Feature: gene Location: 371591-372649 bp Ori: AIM28779.1 Feature: domain Description: DDE_Tnp_1 Location: 371948-372635 bp Feature: domain Description: DDE_Tnp_1 Location: 371 948-372635 bp Feature: gene Location: 373154-374461 bp Ori: AIM28780.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373439-374078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373439-374078 bp Feature: domain Description: GIIM Note: maturase Location: 374153-374378 bp Feature: domain Description: GIIM Note: maturase Location: 3741 53-374378 bp Feature: gene Location: 374508-374996 bp Ori: AIM28781.1 Feature: domain Description: DDE_Tnp_1 Location: 374613-374715 bp Feature: domain Description: DDE_Tnp_1 Location: 37461 3-37471 5 bp Feature: gene Location: 375216-376265 bp Ori: AIM28782.1 Feature: domain Description: SrmB Location: 375219-376032 bp Feature: domain Description: SrmB Location: 37521 9-376032 bp Feature: domain Description: RRM_BsYxiN_like Location: 376041-376254 bp Feature: domain Description: RRM_BsYxiN_like Location: 376041 -376254 bp Feature: gene Location: 494630-495190 bp Ori: AIM28889.1 Feature: domain Description: uvsE Location: 494633-495146 bp Feature: domain Description: uvsE Location: 494633-4951 46 bp Feature: gene Location: 495416-496474 bp Ori: AIM28890.1 Feature: domain Description: DDE_Tnp_1 Location: 495773-496460 bp Feature: domain Description: DDE_Tnp_1 Location: 495773-496460 bp Feature: gene Location: 496979-498286 bp Ori: AIM28891.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 497264-497903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 497264-497903 bp Feature: domain Description: GIIM Note: maturase Location: 497978-498203 bp Feature: domain Description: GIIM Note: maturase Location: 497978-498203 bp Feature: gene Location: 498511-498822 bp Feature: gene Location: 499252-500445 bp Ori: AIM28893.1 Feature: domain Description: cls Location: 499339-500419 bp Feature: domain Description: cls Location: 499339-50041 9 bp Feature: gene Location: 760236-761168 bp Ori: AIM29183.1 Feature: domain Description: CBM_4_9 Location: 760338-760680 bp Feature: domain Description: CBM_4_9 Location: 760338-760680 bp Feature: domain Description: CBM_4_9 Location: 760755-761112 bp Feature: domain Description: CBM_4_9 Location: 760755-761 1 1 2 bp Feature: gene Location: 761512-762570 bp Ori: AIM29184.1 Feature: domain Description: DDE_Tnp_1 Location: 761869-762556 bp Feature: domain Description: DDE_Tnp_1 Location: 761 869-762556 bp Feature: gene Location: 763075-764382 bp Ori: AIM29185.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 763360-763999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 763360-763999 bp Feature: domain Description: GIIM Note: maturase Location: 764074-764299 bp Feature: domain Description: GIIM Note: maturase Location: 764074-764299 bp Feature: gene Location: 764607-764918 bp Feature: gene Location: 765126-765446 bp Feature: gene Location: 937472-937585 bp Feature: gene Location: 937600-939099 bp Ori: AIM29395.1 Feature: domain Description: Smc Location: 937654-938335 bp Feature: domain Description: Smc Location: 937654-938335 bp Feature: domain Description: PhageMin_Tail Location: 938500-939001 bp Feature: domain Description: PhageMin_Tail Location: 938500-939001 bp Feature: gene Location: 939773-940468 bp Ori: AIM29396.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940067-940403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940067-940403 bp Feature: gene Location: 940561-941577 bp Ori: AIM29397.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940582-940762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940582-940762 bp Feature: domain Description: HNHc Note: nucleases Location: 941323-941461 bp Feature: domain Description: HNHc Note: nucleases Location: 941 323-941 461 bp Feature: gene Location: 941687-944128 bp Ori: AIM29398.1 Feature: domain Description: tape_meas_TP901 Location: 941777-942212 bp Feature: domain Description: tape_meas_TP901 Location: 941 777-94221 2 bp Feature: gene Location: 944143-945624 bp Ori: AIM29399.1 Feature: domain Description: Sipho_tail Location: 944209-945622 bp Feature: domain Description: Sipho_tail Location: 944209-945622 bp Feature: gene Location: 1981378-1982115 bp Ori: AIM30512.1 Gene: rnc Feature: domain Description: rnc Location: 1981429-1982107 bp Feature: domain Description: rnc Location: 1 981 429-1 9821 07 bp Feature: gene Location: 1982262-1982753 bp Ori: AIM30513.1 Feature: domain Description: SMC_prok_B Location: 1982268-1982736 bp Feature: domain Description: SMC_prok_B Location: 1 982268-1 982736 bp Feature: gene Location: 1983427-1985232 bp Ori: AIM30514.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1983721-1984417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 983721 -1 98441 7 bp Feature: domain Description: HNHc Note: nucleases Location: 1984978-1985116 bp Feature: domain Description: HNHc Note: nucleases Location: 1 984978-1 9851 1 6 bp Feature: gene Location: 1985576-1988437 bp Ori: AIM30515.1 Gene: smc Feature: domain Description: SMC_prok_B Location: 1985582-1988405 bp Feature: domain Description: SMC_prok_B Location: 1 985582-1 988405 bp Feature: gene Location: 1988453-1989442 bp Ori: AIM30516.1 Gene: ftsY Feature: domain Description: PRK10416 Location: 1988477-1989419 bp Feature: domain Description: PRK1 041 6 Location: 1 988477-1 98941 9 bp Feature: gene Location: 2184802-2185278 bp Ori: AIM30712.1 Feature: domain Description: CdnL Location: 2184820-2185273 bp Feature: domain Description: CdnL Location: 21 84820-21 85273 bp Feature: gene Location: 2185840-2186094 bp Ori: AIM30713.1 Feature: domain Description: FadH Location: 2185927-2186059 bp Feature: domain Description: FadH Location: 21 85927-21 86059 bp Feature: gene Location: 2186757-2188562 bp Ori: AIM30714.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2187051-2187747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 87051 -21 87747 bp Feature: domain Description: HNHc Note: nucleases Location: 2188308-2188446 bp Feature: domain Description: HNHc Note: nucleases Location: 21 88308-21 88446 bp Feature: gene Location: 2188614-2189573 bp Ori: AIM30715.1 Feature: domain Description: OYE_like_FMN Location: 2188665-2189544 bp Feature: domain Description: OYE_like_FMN Location: 21 88665-21 89544 bp Feature: gene Location: 2189641-2191215 bp Ori: AIM30716.1 Feature: domain Description: GltS_FMN Location: 2189788-2191150 bp Feature: domain Description: GltS_FMN Location: 21 89788-21 91 1 50 bp Feature: gene Location: 2360507-2360881 bp Feature: gene Location: 2360974-2362032 bp Ori: AIM30876.1 Feature: domain Description: DDE_Tnp_1 Location: 2361331-2362018 bp Feature: domain Description: DDE_Tnp_1 Location: 2361 331 -236201 8 bp Feature: gene Location: 2362537-2363844 bp Ori: AIM30877.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2362822-2363461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2362822-2363461 bp Feature: domain Description: GIIM Note: maturase Location: 2363536-2363761 bp Feature: domain Description: GIIM Note: maturase Location: 2363536-2363761 bp Feature: gene Location: 2364069-2364380 bp Feature: gene Location: 2364491-2365486 bp Ori: AIM30879.1 Feature: domain Description: COG4584 Location: 2364953-2365343 bp Feature: domain Description: COG4584 Location: 2364953-2365343 bp Feature: gene Location: 2700891-2701598 bp Ori: AIM31232.1 Feature: domain Description: OmpR Location: 2700900-2701569 bp Feature: domain Description: OmpR Location: 2700900-2701 569 bp Feature: gene Location: 2701718-2701846 bp Feature: gene Location: 2702520-2704325 bp Ori: AIM31234.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2702814-2703510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270281 4-270351 0 bp Feature: domain Description: HNHc Note: nucleases Location: 2704071-2704209 bp Feature: domain Description: HNHc Note: nucleases Location: 2704071 -2704209 bp Feature: gene Location: 2704519-2705184 bp Ori: AIM31235.1 Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 2704849-2705173 bp Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 2704849-27051 73 bp Feature: gene Location: 2705618-2707264 bp Ori: AIM31236.1 Feature: domain Description: Uup Location: 2705645-2705876 bp Feature: domain Description: Uup Location: 2705645-2705876 bp Feature: domain Description: Uup Location: 2705891-2707100 bp Feature: domain Description: Uup Location: 2705891 -27071 00 bp Feature: gene Location: 3342361-3343689 bp Ori: AIM31923.1 Feature: domain Description: MgtE Location: 3342376-3343681 bp Feature: domain Description: MgtE Location: 3342376-3343681 bp Feature: gene Location: 3344323-3344829 bp Ori: AIM31924.1 Feature: domain Description: RimL Location: 3344332-3344827 bp Feature: domain Description: RimL Location: 3344332-3344827 bp Feature: gene Location: 3345326-3347149 bp Ori: AIM31925.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3345590-3346424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3345590-3346424 bp Feature: domain Description: Intron_maturas2 Location: 3346493-3346832 bp Feature: domain Description: Intron_maturas2 Location: 3346493-3346832 bp Feature: domain Description: HNHc Note: nucleases Location: 3346970-3347126 bp Feature: domain Description: HNHc Note: nucleases Location: 3346970-33471 26 bp Feature: gene Location: 3347725-3348306 bp Ori: AIM31926.1 Feature: domain Description: Lysozyme_like Location: 3347860-3348295 bp Feature: domain Description: Lysozyme_like Location: 3347860-3348295 bp Feature: gene Location: 3348527-3348661 bp Feature: gene Location: 3706348-3706896 bp Ori: AIM32271.1 Feature: domain Description: BclA_C Location: 3706486-3706894 bp Feature: domain Description: BclA_C Location: 3706486-3706894 bp Feature: gene Location: 3707049-3708350 bp Ori: AIM32272.1 Feature: domain Description: EstA Location: 3707079-3707292 bp Feature: domain Description: EstA Location: 3707079-3707292 bp Feature: gene Location: 3708495-3710318 bp Ori: AIM32273.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3708765-3709593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3708765-3709593 bp Feature: domain Description: Intron_maturas2 Location: 3709665-3709983 bp Feature: domain Description: Intron_maturas2 Location: 3709665-3709983 bp Feature: domain Description: HNHc Note: nucleases Location: 3710136-3710289 bp Feature: domain Description: HNHc Note: nucleases Location: 371 01 36-371 0289 bp Feature: gene Location: 3710919-3711200 bp Feature: gene Location: 3711732-3712571 bp Ori: AIM32275.1 Feature: domain Description: NhoA Location: 3711750-3712542 bp Feature: domain Description: NhoA Location: 371 1 750-371 2542 bp Feature: gene Location: 3812350-3812502 bp Feature: gene Location: 3812621-3812932 bp Feature: gene Location: 3813157-3814464 bp Ori: AIM32379.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3813442-3814081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381 3442-381 4081 bp Feature: domain Description: GIIM Note: maturase Location: 3814156-3814381 bp Feature: domain Description: GIIM Note: maturase Location: 381 41 56-381 4381 bp Feature: gene Location: 3815073-3816026 bp Ori: AIM32380.1 Feature: domain Description: DDE_Tnp_1 Location: 3815430-3815853 bp Feature: domain Description: DDE_Tnp_1 Location: 381 5430-381 5853 bp Feature: gene Location: 3816190-3816507 bp Feature: gene Location: 4890524-4890655 bp Feature: gene Location: 4890868-4891125 bp Feature: gene Location: 4891401-4892708 bp Ori: AIM33583.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4891686-4892325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4891 686-4892325 bp Feature: domain Description: GIIM Note: maturase Location: 4892400-4892625 bp Feature: domain Description: GIIM Note: maturase Location: 4892400-4892625 bp Feature: gene Location: 4893213-4893569 bp Ori: AIM33584.1 Feature: domain Description: DDE_Tnp_1 Location: 4893369-4893555 bp Feature: domain Description: DDE_Tnp_1 Location: 4893369-4893555 bp Feature: gene Location: 4894063-4894524 bp Feature: gene Location: 5277807-5278193 bp Ori: AIM33989.1 Gene: gloA Feature: domain Description: VOC_Bs_YwkD_like Location: 5277822-5278188 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 5277822-52781 88 bp Feature: gene Location: 5278413-5278724 bp Feature: gene Location: 5278949-5280256 bp Ori: AIM33991.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5279234-5279873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5279234-5279873 bp Feature: domain Description: GIIM Note: maturase Location: 5279948-5280173 bp Feature: domain Description: GIIM Note: maturase Location: 5279948-52801 73 bp Feature: gene Location: 5280761-5281819 bp Ori: AIM33992.1 Feature: domain Description: DDE_Tnp_1 Location: 5281118-5281805 bp Feature: domain Description: DDE_Tnp_1 Location: 5281 1 1 8-5281 805 bp Feature: gene Location: 5281920-5283098 bp Ori: AIM33993.1 Feature: domain Description: NupC Location: 5281923-5283096 bp Feature: domain Description: NupC Location: 5281 923-5283096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlA (COG5632), SH3b (smart00287), Holin_SPP1 (pfam04688), RVT-GII, GIIM (pfam08388), XhlA (pfam10779), DppB (COG0601), DDE_Tnp_1 (pfam01609), SrmB (COG0513), RRM_BsYxiN_like (cd12500)
uvsE (PRK02308), cls, CBM_4_9 (pfam02018), Smc (COG1196), PhageMin_Tail (pfam10145), HNHc (smart00507), tape_meas_TP901 (TIGR01760), Sipho_tail (pfam05709), rnc (PRK00102), SMC_prok_B (TIGR02168)
PRK10416 (signal recognition particle-docking protein FtsY; Provisional), CdnL (COG1329), FadH (COG1902), OYE_like_FMN (cd02933), GltS_FMN (cd02808), COG4584 (Transposase ), OmpR (COG0745), HATPase_BceS-YxdK-YvcQ-like (cd16948), Uup (COG0488), MgtE (pfam01769)
RimL (COG1670), Intron_maturas2 (pfam01348), Lysozyme_like (pfam13702), BclA_C (pfam18573), EstA (COG1075), NhoA (COG2162), VOC_Bs_YwkD_like (cd08352), NupC (COG1972)

Seq: CP007615.1 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence (293574 bp)
Overview 1 RT 1: 16335-27129 bp 2 RT 2: 36346-40835 bp 3 RT 3: 68271-81200 bp 4 RT 4: 125546-131503 bp 5 RT 5: 246813-252545 bp Neighborhood of RT #1 [16335, 30371] NlpD Spr RVT-GII Intron_maturas2 HNHc CwlT_like RVT-GII HNHc CwlT_like RVT-GII HNHc CwlT_like TrbL Neighborhood of RT #2 [36346, 40835] DUF3854 LPD1 RVT-GII HNHc Neighborhood of RT #3 [68271, 81200] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII GIIM HNHc Ftsk_gamma Neighborhood of RT #4 [125546, 132045] RVT-GII GIIM KOG1000 KOG1000 Neighborhood of RT #5 [246813, 252556] KefB DDE_Tnp_1 RVT-GII GIIM RhaT Feature: gene Location: 16335-17210 bp Ori: AIM34546.1 Feature: domain Description: NlpD Location: 16350-16779 bp Feature: domain Description: NlpD Location: 16350-16779 bp Feature: domain Description: Spr Location: 16815-17151 bp Feature: domain Description: Spr Location: 16815-17151 bp Feature: gene Location: 17234-17368 bp Feature: gene Location: 17370-19193 bp Ori: AIM34548.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17634-18468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17634-18468 bp Feature: domain Description: Intron_maturas2 Location: 18537-18876 bp Feature: domain Description: Intron_maturas2 Location: 18537-18876 bp Feature: domain Description: HNHc Note: nucleases Location: 19014-19170 bp Feature: domain Description: HNHc Note: nucleases Location: 19014-19170 bp Feature: gene Location: 19769-19960 bp Ori: AIM34549.1 Feature: domain Description: CwlT_like Location: 19796-19952 bp Feature: domain Description: CwlT_like Location: 19796-19952 bp Feature: gene Location: 20029-21825 bp Ori: AIM34550.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20287-20992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 02 87-2 0992 bp Feature: domain Description: HNHc Note: nucleases Location: 21553-21688 bp Feature: domain Description: HNHc Note: nucleases Location: 2 1553-2 1688 bp Feature: gene Location: 22598-22765 bp Ori: AIM34551.1 Feature: domain Description: CwlT_like Location: 22640-22748 bp Feature: domain Description: CwlT_like Location: 2 2 640-2 2 748 bp Feature: gene Location: 22881-24686 bp Ori: AIM34552.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23175-23871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3175-2 3871 bp Feature: domain Description: HNHc Note: nucleases Location: 24432-24570 bp Feature: domain Description: HNHc Note: nucleases Location: 2 4432 -2 4570 bp Feature: gene Location: 25360-26355 bp Ori: AIM34553.1 Feature: domain Description: CwlT_like Location: 26209-26332 bp Feature: domain Description: CwlT_like Location: 2 62 09-2 6332 bp Feature: gene Location: 26352-30371 bp Ori: AIM34554.1 Feature: domain Description: TrbL Location: 26631-27129 bp Feature: domain Description: TrbL Location: 2 6631-2 712 9 bp Feature: gene Location: 36346-37659 bp Ori: AIM34564.1 Feature: domain Description: DUF3854 Location: 37291-37630 bp Feature: domain Description: DUF3854 Location: 372 91-37630 bp Feature: gene Location: 37649-38446 bp Ori: AIM34565.1 Feature: domain Description: LPD1 Location: 38195-38390 bp Feature: domain Description: LPD1 Location: 38195-38390 bp Feature: gene Location: 38518-40314 bp Ori: AIM34566.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38812-39508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38812 -39508 bp Feature: domain Description: HNHc Note: nucleases Location: 40108-40183 bp Feature: domain Description: HNHc Note: nucleases Location: 40108-40183 bp Feature: gene Location: 40346-40600 bp Feature: gene Location: 40716-40835 bp Feature: gene Location: 68271-68741 bp Feature: gene Location: 68759-69904 bp Feature: gene Location: 70505-72328 bp Ori: AIM34598.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70775-71603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70775-71603 bp Feature: domain Description: Intron_maturas2 Location: 71675-71993 bp Feature: domain Description: Intron_maturas2 Location: 71675-71993 bp Feature: domain Description: HNHc Note: nucleases Location: 72146-72299 bp Feature: domain Description: HNHc Note: nucleases Location: 72 146-72 2 99 bp Feature: gene Location: 72394-72507 bp Feature: gene Location: 72467-72613 bp Feature: gene Location: 73295-75085 bp Ori: AIM34601.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73592-74288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73592 -742 88 bp Feature: domain Description: HNHc Note: nucleases Location: 74828-74960 bp Feature: domain Description: HNHc Note: nucleases Location: 7482 8-74960 bp Feature: gene Location: 75151-75588 bp Feature: gene Location: 76261-78135 bp Ori: AIM34603.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76561-77266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76561-772 66 bp Feature: domain Description: GIIM Note: maturase Location: 77380-77548 bp Feature: domain Description: GIIM Note: maturase Location: 77380-77548 bp Feature: domain Description: HNHc Note: nucleases Location: 77896-78061 bp Feature: domain Description: HNHc Note: nucleases Location: 77896-78061 bp Feature: gene Location: 78476-80158 bp Ori: AIM34604.1 Gene: ftsK Feature: domain Description: Ftsk_gamma Location: 79103-79283 bp Feature: domain Description: Ftsk_gamma Location: 79103-792 83 bp Feature: gene Location: 80430-81200 bp Feature: gene Location: 125546-125773 bp Feature: gene Location: 125845-126753 bp Feature: gene Location: 127500-129365 bp Ori: AIM34655.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127800-128505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 7800-12 8505 bp Feature: domain Description: GIIM Note: maturase Location: 128592-128775 bp Feature: domain Description: GIIM Note: maturase Location: 12 8592 -12 8775 bp Feature: gene Location: 129511-129633 bp Feature: gene Location: 129640-132045 bp Ori: AIM34657.1 Gene: hepA Feature: domain Description: KOG1000 Location: 130351-130567 bp Feature: domain Description: KOG1000 Location: 130351-130567 bp Feature: domain Description: KOG1000 Location: 131170-131503 bp Feature: domain Description: KOG1000 Location: 131170-131503 bp Feature: gene Location: 246813-247673 bp Ori: AIM34779.1 Feature: domain Description: KefB Location: 246822-247644 bp Feature: domain Description: KefB Location: 2 4682 2 -2 47644 bp Feature: gene Location: 247820-248878 bp Ori: AIM34780.1 Feature: domain Description: DDE_Tnp_1 Location: 248177-248864 bp Feature: domain Description: DDE_Tnp_1 Location: 2 48177-2 48864 bp Feature: gene Location: 249383-250690 bp Ori: AIM34781.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249668-250307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 49668-2 50307 bp Feature: domain Description: GIIM Note: maturase Location: 250382-250607 bp Feature: domain Description: GIIM Note: maturase Location: 2 50382 -2 50607 bp Feature: gene Location: 250903-251220 bp Feature: gene Location: 251684-252556 bp Ori: AIM34783.1 Feature: domain Description: RhaT Location: 251711-252545 bp Feature: domain Description: RhaT Location: 2 51711-2 52 545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like, TrbL (pfam04610), DUF3854 (pfam12965), LPD1 (pfam18796), GIIM (pfam08388)
Ftsk_gamma (smart00843), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), KefB (COG0475), DDE_Tnp_1 (pfam01609), RhaT (TIGR00776)

Seq: CP007616.1 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence (416210 bp)
Overview 1 RT 1: 7436-20804 bp 2 RT 2: 153156-162343 bp 3 RT 3: 200640-203842 bp Neighborhood of RT #1 [7436, 20983] PRK09183 COG4584 RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Neighborhood of RT #2 [153156, 162343] RapH_N TPR TPR PRK13922 AE_Prim_S_like RVT-UG10 Neighborhood of RT #3 [200640, 203842] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 7436-8188 bp Ori: AIM34842.1 Feature: domain Description: PRK09183 Location: 7442-8168 bp Feature: domain Description: PRK09183 Location: 7442-8168 bp Feature: gene Location: 8178-9473 bp Ori: AIM34843.1 Feature: domain Description: COG4584 Location: 8592-8982 bp Feature: domain Description: COG4584 Location: 8592-8982 bp Feature: gene Location: 10178-12001 bp Ori: AIM34844.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10448-11276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10448-11276 bp Feature: domain Description: Intron_maturas2 Location: 11348-11666 bp Feature: domain Description: Intron_maturas2 Location: 113 48-11666 bp Feature: domain Description: HNHc Note: nucleases Location: 11819-11972 bp Feature: domain Description: HNHc Note: nucleases Location: 11819-11972 bp Feature: gene Location: 12140-12286 bp Feature: gene Location: 13004-14407 bp Ori: AIM34846.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13265-13961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 265-13 961 bp Feature: gene Location: 14436-14759 bp Ori: AIM34847.1 Feature: domain Description: HNHc Note: nucleases Location: 14499-14634 bp Feature: domain Description: HNHc Note: nucleases Location: 14499-1463 4 bp Feature: gene Location: 14825-15262 bp Feature: gene Location: 15934-17808 bp Ori: AIM34849.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16234-16939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1623 4-1693 9 bp Feature: domain Description: GIIM Note: maturase Location: 17053-17221 bp Feature: domain Description: GIIM Note: maturase Location: 17053 -17221 bp Feature: gene Location: 18041-19741 bp Ori: AIM34850.1 Feature: domain Description: TraG-D_C Location: 18053-18371 bp Feature: domain Description: TraG-D_C Location: 18053 -183 71 bp Feature: domain Description: Ftsk_gamma Location: 18731-18911 bp Feature: domain Description: Ftsk_gamma Location: 1873 1-18911 bp Feature: domain Description: Ftsk_gamma Location: 19064-19238 bp Feature: domain Description: Ftsk_gamma Location: 19064-1923 8 bp Feature: gene Location: 20000-20983 bp Ori: AIM34851.1 Feature: domain Description: rpsA Location: 20267-20804 bp Feature: domain Description: rpsA Location: 20267-20804 bp Feature: gene Location: 153156-154247 bp Ori: AIM35005.1 Feature: domain Description: RapH_N Location: 153177-153348 bp Feature: domain Description: RapH_N Location: 153 177-153 3 48 bp Feature: domain Description: TPR Location: 153483-153750 bp Feature: domain Description: TPR Location: 153 483 -153 750 bp Feature: domain Description: TPR Location: 153795-154206 bp Feature: domain Description: TPR Location: 153 795-154206 bp Feature: gene Location: 154725-154937 bp Ori: AIM35006.1 Feature: domain Description: PRK13922 Location: 154797-154917 bp Feature: domain Description: PRK13 922 Location: 154797-154917 bp Feature: gene Location: 155213-160852 bp Ori: AIM35007.1 Feature: domain Description: AE_Prim_S_like Location: 155423-155642 bp Feature: domain Description: AE_Prim_S_like Location: 155423 -155642 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 156629-157283 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 156629-157283 bp Feature: gene Location: 161291-161716 bp Feature: gene Location: 161726-162343 bp Feature: gene Location: 200640-200930 bp Ori: AIM35037.1 Feature: domain Description: DDE_Tnp_1 Location: 200742-200916 bp Feature: domain Description: DDE_Tnp_1 Location: 200742-200916 bp Feature: gene Location: 201082-201261 bp Feature: gene Location: 201435-202742 bp Ori: AIM35039.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201720-202359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201720-2023 59 bp Feature: domain Description: GIIM Note: maturase Location: 202434-202659 bp Feature: domain Description: GIIM Note: maturase Location: 20243 4-202659 bp Feature: gene Location: 203076-203522 bp Feature: gene Location: 203699-203842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717), RapH_N (pfam18801)
TPR (smart00028), PRK13922 (rod shape-determining protein MreC; Provisional), AE_Prim_S_like (cl01287), RVT-UG10, DDE_Tnp_1 (pfam01609)