myRT

myRT report for GCA_000750315.1_ASM75031v1

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Seq: CP008943.1 Yersinia pseudotuberculosis strain ATCC 6904, complete genome (4806594 bp)
Overview 1 RT 1: 1232059-1238586 bp 2 RT 2: 3621346-3624507 bp Neighborhood of RT #1 [1232059, 1238586] PRK13889 AAA_21 RVT-Retrons Neighborhood of RT #2 [3621346, 3624533] HTH_XRE RVT-Retrons Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 1232059-1233456 bp Ori: AIN12902.1 Feature: domain Description: PRK13889 Location: 1232062-1232644 bp Feature: domain Description: PRK1 3889 Location: 1 232062-1 232644 bp Feature: gene Location: 1233676-1235793 bp Ori: AIN14323.1 Feature: domain Description: AAA_21 Location: 1233751-1234660 bp Feature: domain Description: AAA_21 Location: 1 233751 -1 234660 bp Feature: gene Location: 1235960-1237063 bp Ori: AIN13806.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1236107-1236662 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2361 07-1 236662 bp Feature: gene Location: 1237436-1237990 bp Feature: gene Location: 1238005-1238586 bp Feature: gene Location: 3621346-3621585 bp Feature: gene Location: 3621640-3621942 bp Ori: AIN16236.1 Feature: domain Description: HTH_XRE Location: 3621652-3621817 bp Feature: domain Description: HTH_XRE Location: 3621 652-3621 81 7 bp Feature: gene Location: 3621911-3622879 bp Ori: AIN12568.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3622064-3622625 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3622064-3622625 bp Feature: gene Location: 3623032-3624030 bp Ori: AIN13291.1 Feature: domain Description: Phage_int_SAM_1 Location: 3623077-3623332 bp Feature: domain Description: Phage_int_SAM_1 Location: 3623077-3623332 bp Feature: domain Description: INT_RitC_C_like Location: 3623413-3623953 bp Feature: domain Description: INT_RitC_C_like Location: 362341 3-3623953 bp Feature: gene Location: 3624027-3624533 bp Ori: AIN12499.1 Feature: domain Description: INT_RitB_C_like Location: 3624030-3624507 bp Feature: domain Description: INT_RitB_C_like Location: 3624030-3624507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), AAA_21 (pfam13304), RVT-Retrons, HTH_XRE (smart00530), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797)