myRT

myRT report for GCA_000755725.1_ASM75572v1

Download annotations/find similar RTs

Seq: CP007782.1 Burkholderia cenocepacia strain DDS 22E-1 chromosome 3, complete sequence (1166794 bp)
Overview 1 RT 1: 413696-420062 bp Neighborhood of RT #1 [413696, 420097] MFS_MucK Histone_HNS RVT-Retrons COG1808 dTDP_HR_like_SDR_e Feature: gene Location: 413696-414943 bp Ori: AIO30362.1 Feature: domain Description: MFS_MucK Location: 413786-414920 bp Feature: domain Description: MFS_MucK Location: 41 3786-41 4920 bp Feature: gene Location: 415238-415567 bp Ori: AIO30580.1 Feature: domain Description: Histone_HNS Location: 415262-415496 bp Feature: domain Description: Histone_HNS Location: 41 5262-41 5496 bp Feature: gene Location: 415921-417270 bp Ori: AIO30695.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 416386-417022 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 6386-41 7022 bp Feature: gene Location: 417578-418975 bp Ori: AIO30141.1 Feature: domain Description: COG1808 Location: 417677-418445 bp Feature: domain Description: COG1 808 Location: 41 7677-41 8445 bp Feature: gene Location: 419132-420097 bp Ori: AIO30486.1 Gene: mat2B Feature: domain Description: dTDP_HR_like_SDR_e Location: 419171-420062 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 41 91 71 -420062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, COG1808 (Uncharacterized membrane protein ), dTDP_HR_like_SDR_e (cd05254)

Seq: CP007783.1 Burkholderia cenocepacia strain DDS 22E-1 chromosome 1, complete sequence (3668832 bp)
Overview 1 RT 1: 809119-813306 bp Neighborhood of RT #1 [809119, 813306] HTH_3 RVT-Retrons Feature: gene Location: 809119-809394 bp Ori: AIO31675.1 Feature: domain Description: HTH_3 Location: 809137-809233 bp Feature: domain Description: HTH_3 Location: 809137-8092 33 bp Feature: gene Location: 810257-811180 bp Feature: gene Location: 811177-812130 bp Ori: AIO33207.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 811294-811885 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8112 94-811885 bp Feature: gene Location: 812466-812825 bp Feature: gene Location: 813067-813306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), RVT-Retrons

Seq: CP007784.1 Burkholderia cenocepacia strain DDS 22E-1 chromosome 2, complete sequence (3209624 bp)
Overview 1 RT 1: 2422417-2430185 bp 2 RT 2: 2938613-2943127 bp Neighborhood of RT #1 [2422417, 2430187] ARO8 TolB TolB RVT-GII GIIM GlxA PRK13034 Neighborhood of RT #2 [2938613, 2943127] HTH_MerR-like_sg2 YncA RVT-UG11 ImmA Feature: gene Location: 2422417-2423835 bp Ori: AIO35310.1 Feature: domain Description: ARO8 Location: 2422420-2423815 bp Feature: domain Description: ARO8 Location: 2422420-2423 815 bp Feature: gene Location: 2424101-2425513 bp Ori: AIO37054.1 Feature: domain Description: TolB Location: 2424245-2424746 bp Feature: domain Description: TolB Location: 2424245-2424746 bp Feature: domain Description: TolB Location: 2424755-2425484 bp Feature: domain Description: TolB Location: 2424755-2425484 bp Feature: gene Location: 2426130-2427335 bp Ori: AIO36809.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2426301-2426916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24263 01-2426916 bp Feature: domain Description: GIIM Note: maturase Location: 2426973-2427177 bp Feature: domain Description: GIIM Note: maturase Location: 2426973 -2427177 bp Feature: gene Location: 2427443-2428468 bp Ori: AIO35659.1 Feature: domain Description: GlxA Location: 2427464-2428400 bp Feature: domain Description: GlxA Location: 2427464-2428400 bp Feature: gene Location: 2428913-2430187 bp Ori: AIO34974.1 Gene: glyA2 Feature: domain Description: PRK13034 Location: 2428928-2430185 bp Feature: domain Description: PRK13 03 4 Location: 2428928-243 0185 bp Feature: gene Location: 2938613-2939458 bp Ori: AIO35405.1 Feature: domain Description: HTH_MerR-like_sg2 Location: 2938670-2939330 bp Feature: domain Description: HTH_MerR-like_sg2 Location: 293 8670-293 93 3 0 bp Feature: gene Location: 2939468-2939866 bp Ori: AIO35745.1 Feature: domain Description: YncA Location: 2939498-2939819 bp Feature: domain Description: YncA Location: 293 9498-293 9819 bp Feature: gene Location: 2940304-2941191 bp Ori: AIO34566.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2940544-2940997 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2940544-2940997 bp Feature: gene Location: 2941345-2942154 bp Ori: AIO36540.1 Feature: domain Description: ImmA Location: 2941537-2941867 bp Feature: domain Description: ImmA Location: 294153 7-2941867 bp Feature: gene Location: 2942537-2943127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ARO8 (COG1167), TolB (COG0823), RVT-GII, GIIM (pfam08388), GlxA (COG4977), PRK13034 (serine hydroxymethyltransferase; Reviewed), HTH_MerR-like_sg2 (cd04778), YncA (COG1247), RVT-UG11, ImmA (COG2856)