myRT

myRT report for GCA_000755765.1_ASM75576v1

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Seq: CP009210.1 Burkholderia pseudomallei strain BDP chromosome 2, complete sequence (3386014 bp)
Overview 1 RT 1: 116659-122157 bp 2 RT 2: 553679-557446 bp Neighborhood of RT #1 [116659, 122189] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM COG3436 rve TnpB_IS66 Neighborhood of RT #2 [553679, 557478] DDE_Tnp_IS66 DDE_Tnp_IS66_C DDE_Tnp_IS66 RVT-GII GIIM COG3436 TnpB_IS66 Feature: gene Location: 116659-116883 bp Feature: gene Location: 117239-118180 bp Ori: AIP83158.1 Feature: domain Description: DDE_Tnp_IS66 Location: 117242-118025 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 7242-1 1 8025 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 118046-118157 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 8046-1 1 81 57 bp Feature: gene Location: 118238-119500 bp Ori: AIP82665.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118442-119099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8442-1 1 9099 bp Feature: domain Description: GIIM Note: maturase Location: 119177-119393 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 91 77-1 1 9393 bp Feature: gene Location: 120018-120653 bp Ori: AIP83773.1 Feature: domain Description: COG3436 Location: 120327-120630 bp Feature: domain Description: COG3436 Location: 1 20327-1 20630 bp Feature: gene Location: 120717-122189 bp Ori: AIP82983.1 Feature: domain Description: rve Location: 121107-121485 bp Feature: domain Description: rve Location: 1 21 1 07-1 21 485 bp Feature: domain Description: TnpB_IS66 Location: 121965-122157 bp Feature: domain Description: TnpB_IS66 Location: 1 21 965-1 221 57 bp Feature: gene Location: 553679-554173 bp Ori: AIP82815.1 Feature: domain Description: DDE_Tnp_IS66 Location: 553688-554018 bp Feature: domain Description: DDE_Tnp_IS66 Location: 553688-55401 8 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 554039-554150 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 554039-5541 50 bp Feature: gene Location: 554242-554634 bp Ori: AIP82652.1 Feature: domain Description: DDE_Tnp_IS66 Location: 554245-554590 bp Feature: domain Description: DDE_Tnp_IS66 Location: 554245-554590 bp Feature: gene Location: 554692-555954 bp Ori: AIP84219.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554896-555553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554896-555553 bp Feature: domain Description: GIIM Note: maturase Location: 555631-555847 bp Feature: domain Description: GIIM Note: maturase Location: 555631 -555847 bp Feature: gene Location: 556472-557101 bp Ori: AIP83538.1 Feature: domain Description: COG3436 Location: 556769-557078 bp Feature: domain Description: COG3436 Location: 556769-557078 bp Feature: gene Location: 557131-557478 bp Ori: AIP82653.1 Feature: domain Description: TnpB_IS66 Location: 557158-557446 bp Feature: domain Description: TnpB_IS66 Location: 5571 58-557446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), COG3436 (Transposase ), rve (pfam00665), TnpB_IS66 (pfam05717)