myRT

myRT report for GCA_000755965.1_ASM75596v1

Download annotations/find similar RTs

Seq: CP008910.1 Burkholderia pseudomallei MSHR5848 chromosome 2, complete sequence (3236215 bp)
Overview 1 RT 1: 2606481-2612698 bp 2 RT 2: 2654351-2660476 bp Neighborhood of RT #1 [2606481, 2612769] rve TnpB_IS66 COG3436 RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C rve_3 Neighborhood of RT #2 [2654351, 2660679] TnpB_IS66 COG3436 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Alginate_lyase Alginate_lyase Feature: gene Location: 2606481-2607953 bp Ori: AIP41885.1 Feature: domain Description: rve Location: 2606871-2607249 bp Feature: domain Description: rve Location: 2606871 -2607249 bp Feature: domain Description: TnpB_IS66 Location: 2607729-2607921 bp Feature: domain Description: TnpB_IS66 Location: 2607729-2607921 bp Feature: gene Location: 2608017-2608652 bp Ori: AIP43583.1 Feature: domain Description: COG3436 Location: 2608326-2608629 bp Feature: domain Description: COG3436 Location: 2608326-2608629 bp Feature: gene Location: 2609170-2610168 bp Ori: AIP42070.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2609374-2609767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2609374-2609767 bp Feature: gene Location: 2610549-2611430 bp Ori: AIP43258.1 Feature: domain Description: DDE_Tnp_IS66 Location: 2610555-2611275 bp Feature: domain Description: DDE_Tnp_IS66 Location: 261 0555-261 1 275 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2611296-2611407 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 261 1 296-261 1 407 bp Feature: gene Location: 2612422-2612769 bp Ori: AIP42150.1 Feature: domain Description: rve_3 Location: 2612503-2612698 bp Feature: domain Description: rve_3 Location: 261 2503-261 2698 bp Feature: gene Location: 2654351-2654686 bp Ori: AIP42721.1 Feature: domain Description: TnpB_IS66 Location: 2654369-2654654 bp Feature: domain Description: TnpB_IS66 Location: 2654369-2654654 bp Feature: gene Location: 2654750-2655385 bp Ori: AIP43008.1 Feature: domain Description: COG3436 Location: 2655059-2655362 bp Feature: domain Description: COG3436 Location: 2655059-2655362 bp Feature: gene Location: 2655903-2657165 bp Ori: AIP42410.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2656107-2656764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26561 07-2656764 bp Feature: domain Description: GIIM Note: maturase Location: 2656842-2657058 bp Feature: domain Description: GIIM Note: maturase Location: 2656842-2657058 bp Feature: gene Location: 2657223-2658146 bp Ori: AIP43141.1 Feature: domain Description: DDE_Tnp_IS66 Location: 2657226-2658009 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2657226-2658009 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2658030-2658141 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2658030-26581 41 bp Feature: gene Location: 2659162-2660679 bp Ori: AIP43146.1 Feature: domain Description: Alginate_lyase Location: 2659720-2660131 bp Feature: domain Description: Alginate_lyase Location: 2659720-26601 31 bp Feature: domain Description: Alginate_lyase Location: 2660320-2660476 bp Feature: domain Description: Alginate_lyase Location: 2660320-2660476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), TnpB_IS66 (pfam05717), COG3436 (Transposase ), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), rve_3 (pfam13683), GIIM (pfam08388), Alginate_lyase (pfam05426)

Seq: CP008909.1 Burkholderia pseudomallei MSHR5848 chromosome 1, complete sequence (4054219 bp)
Overview 1 RT 1: 989346-994712 bp Neighborhood of RT #1 [989346, 994729] RVT-Retrons AAA_21 AAA_21 PinE Feature: gene Location: 989346-989504 bp Feature: gene Location: 989826-990602 bp Feature: gene Location: 991451-992419 bp Ori: AIP39953.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 991580-992138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 991580-992 138 bp Feature: gene Location: 992416-993759 bp Ori: AIP41364.1 Feature: domain Description: AAA_21 Location: 992497-992647 bp Feature: domain Description: AAA_2 1 Location: 992 497-992 647 bp Feature: domain Description: AAA_21 Location: 992989-993160 bp Feature: domain Description: AAA_2 1 Location: 992 989-993160 bp Feature: gene Location: 994154-994729 bp Ori: AIP38528.1 Feature: domain Description: PinE Location: 994163-994712 bp Feature: domain Description: PinE Location: 994163-994712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_21 (pfam13304), PinE (COG1961)