myRT

myRT report for GCA_000755985.1_ASM75598v1

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Seq: CP008726.1 Burkholderia oklahomensis strain EO147 chromosome 1, complete sequence (4192008 bp)
Overview 1 RT 1: 442650-447277 bp 2 RT 2: 2613681-2617763 bp Neighborhood of RT #1 [442650, 447390] InsE TnpB_IS66 RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C PRK06526 Neighborhood of RT #2 [2613681, 2617763] RVT-Retrons Feature: gene Location: 442650-443057 bp Ori: AIO67116.1 Feature: domain Description: InsE Location: 442695-442935 bp Feature: domain Description: InsE Location: 442695-442935 bp Feature: gene Location: 443054-443386 bp Ori: AIO67795.1 Feature: domain Description: TnpB_IS66 Location: 443081-443369 bp Feature: domain Description: TnpB_IS66 Location: 443081 -443369 bp Feature: gene Location: 443716-445197 bp Ori: AIO67140.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444127-444817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4441 27-44481 7 bp Feature: gene Location: 445340-446887 bp Ori: AIO67677.1 Feature: domain Description: LZ_Tnp_IS66 Location: 445442-445658 bp Feature: domain Description: LZ_Tnp_IS66 Location: 445442-445658 bp Feature: domain Description: zf-IS66 Location: 445682-445805 bp Feature: domain Description: zf-IS66 Location: 445682-445805 bp Feature: domain Description: DDE_Tnp_IS66 Location: 445853-446708 bp Feature: domain Description: DDE_Tnp_IS66 Location: 445853-446708 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 446729-446840 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 446729-446840 bp Feature: gene Location: 447031-447390 bp Ori: AIO67658.1 Feature: domain Description: PRK06526 Location: 447034-447277 bp Feature: domain Description: PRK06526 Location: 447034-447277 bp Feature: gene Location: 2613681-2614412 bp Feature: gene Location: 2614465-2615346 bp Feature: gene Location: 2615389-2616423 bp Ori: AIO65205.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2615545-2616100 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 261 5545-261 61 00 bp Feature: gene Location: 2616737-2616979 bp Feature: gene Location: 2617449-2617763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), TnpB_IS66 (pfam05717), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PRK06526 (transposase; Provisional), RVT-Retrons