myRT

myRT report for GCA_000756615.1_ASM75661v1

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Seq: CP009288.1 Paenibacillus durus strain DSM 1735, complete genome (6038347 bp)
Overview 1 RT 1: 877949-881697 bp 2 RT 2: 4314569-4319834 bp 3 RT 3: 4690381-4699868 bp Neighborhood of RT #1 [877949, 881933] Nfi InsE RVT-GII GIIM Neighborhood of RT #2 [4314569, 4319848] RVT-GII GIIM DUF4367 Neighborhood of RT #3 [4690381, 4699882] DDE_3 DDE_Tnp_1 RVT-GII RVT-GII GIIM GH4_GlvA_pagL_like PTS-IIBC-alpha Feature: gene Location: 877949-878638 bp Ori: AIQ11278.1 Feature: domain Description: Nfi Location: 877970-878612 bp Feature: domain Description: Nfi Location: 877970-87861 2 bp Feature: gene Location: 879051-879344 bp Ori: AIQ11279.1 Feature: domain Description: InsE Location: 879063-879264 bp Feature: domain Description: InsE Location: 879063-879264 bp Feature: gene Location: 880410-881933 bp Ori: AIQ11280.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880668-881412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880668-881 41 2 bp Feature: domain Description: GIIM Note: maturase Location: 881484-881697 bp Feature: domain Description: GIIM Note: maturase Location: 881 484-881 697 bp Feature: gene Location: 4314569-4316092 bp Ori: AIQ13847.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4314827-4315571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 4827-431 5571 bp Feature: domain Description: GIIM Note: maturase Location: 4315643-4315856 bp Feature: domain Description: GIIM Note: maturase Location: 431 5643-431 5856 bp Feature: gene Location: 4317710-4317982 bp Feature: gene Location: 4319072-4319848 bp Ori: AIQ13849.1 Feature: domain Description: DUF4367 Location: 4319519-4319834 bp Feature: domain Description: DUF4367 Location: 431 951 9-431 9834 bp Feature: gene Location: 4690381-4690869 bp Ori: AIQ14157.1 Feature: domain Description: DDE_3 Location: 4690396-4690789 bp Feature: domain Description: DDE_3 Location: 4690396-4690789 bp Feature: gene Location: 4691351-4692373 bp Ori: AIQ14158.1 Feature: domain Description: DDE_Tnp_1 Location: 4691519-4692332 bp Feature: domain Description: DDE_Tnp_1 Location: 4691 51 9-4692332 bp Feature: gene Location: 4692950-4694272 bp Ori: AIQ14159.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4693205-4693898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4693205-4693898 bp Feature: gene Location: 4694855-4696105 bp Ori: AIQ14160.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4695047-4695668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4695047-4695668 bp Feature: domain Description: GIIM Note: maturase Location: 4695716-4695947 bp Feature: domain Description: GIIM Note: maturase Location: 469571 6-4695947 bp Feature: gene Location: 4696896-4698224 bp Ori: AIQ14161.1 Feature: domain Description: GH4_GlvA_pagL_like Location: 4696914-4698222 bp Feature: domain Description: GH4_GlvA_pagL_like Location: 469691 4-4698222 bp Feature: gene Location: 4698299-4699882 bp Ori: AIQ14162.1 Feature: domain Description: PTS-IIBC-alpha Location: 4698320-4699868 bp Feature: domain Description: PTS-IIBC-alpha Location: 4698320-4699868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nfi (COG1515), InsE (COG2963), RVT-GII, GIIM (pfam08388), DUF4367 (pfam14285), DDE_3 (pfam13358), DDE_Tnp_1 (pfam01609), GH4_GlvA_pagL_like (cd05298), PTS-IIBC-alpha (TIGR02005)