myRT

myRT report for GCA_000775395.1_ASM77539v1

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Seq: CP009775.1 Klebsiella pneumoniae subsp. pneumoniae strain KPNIH32, complete genome (5515525 bp)
Overview 1 RT 1: 1336639-1340046 bp 2 RT 2: 1779281-1784829 bp 3 RT 3: 2121782-2127200 bp 4 RT 4: 3619476-3625959 bp 5 RT 5: 4231787-4237448 bp Neighborhood of RT #1 [1336639, 1340147] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1779281, 1784855] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [2121782, 2127202] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [3619476, 3625961] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #5 [4231787, 4237525] DinI RVT-GII Phage_GPA dam Feature: gene Location: 1336639-1337370 bp Ori: AIW75417.1 Feature: domain Description: Laminin_G_3 Location: 1336960-1337314 bp Feature: domain Description: Laminin_G_3 Location: 1 336960-1 33731 4 bp Feature: gene Location: 1337367-1337576 bp Feature: gene Location: 1338029-1339513 bp Ori: AIW75419.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1338431-1339121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 338431 -1 3391 21 bp Feature: gene Location: 1339591-1339830 bp Feature: gene Location: 1339830-1340147 bp Ori: AIW75421.1 Feature: domain Description: PRK10276 Location: 1339836-1339950 bp Feature: domain Description: PRK1 0276 Location: 1 339836-1 339950 bp Feature: domain Description: PRK10276 Location: 1339977-1340046 bp Feature: domain Description: PRK1 0276 Location: 1 339977-1 340046 bp Feature: gene Location: 1779281-1779844 bp Ori: AIW75816.1 Feature: domain Description: YbjK Location: 1779287-1779824 bp Feature: domain Description: YbjK Location: 1 779287-1 779824 bp Feature: gene Location: 1779967-1781019 bp Ori: AIW75817.1 Feature: domain Description: int Location: 1779970-1780969 bp Feature: domain Description: int Location: 1 779970-1 780969 bp Feature: gene Location: 1781438-1782922 bp Ori: AIW75818.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1781840-1782530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 781 840-1 782530 bp Feature: gene Location: 1783021-1783965 bp Feature: gene Location: 1783977-1784855 bp Ori: AIW75820.1 Feature: domain Description: Phage_CI_repr Location: 1784004-1784187 bp Feature: domain Description: Phage_CI_repr Location: 1 784004-1 7841 87 bp Feature: domain Description: Phage_CI_repr Location: 1784316-1784508 bp Feature: domain Description: Phage_CI_repr Location: 1 78431 6-1 784508 bp Feature: domain Description: Phage_CI_C Location: 1784535-1784829 bp Feature: domain Description: Phage_CI_C Location: 1 784535-1 784829 bp Feature: gene Location: 2121782-2122921 bp Ori: AIW76143.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2121965-2122865 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 21 21 965-21 22865 bp Feature: gene Location: 2123092-2123334 bp Ori: AIW76144.1 Feature: domain Description: DinI Location: 2123143-2123323 bp Feature: domain Description: DinI Location: 21 231 43-21 23323 bp Feature: gene Location: 2123952-2125436 bp Ori: AIW76145.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2124354-2125044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 24354-21 25044 bp Feature: gene Location: 2125515-2125934 bp Ori: AIW76146.1 Feature: domain Description: PRK10276 Location: 2125518-2125929 bp Feature: domain Description: PRK1 0276 Location: 21 2551 8-21 25929 bp Feature: gene Location: 2125937-2127202 bp Ori: AIW76147.1 Feature: domain Description: umuC Location: 2125940-2127200 bp Feature: domain Description: umuC Location: 21 25940-21 27200 bp Feature: gene Location: 3619476-3620534 bp Ori: AIW77543.1 Feature: domain Description: YccC Location: 3619482-3620520 bp Feature: domain Description: YccC Location: 361 9482-3620520 bp Feature: gene Location: 3620633-3621106 bp Ori: AIW77544.1 Feature: domain Description: PRK10016 Location: 3620636-3621095 bp Feature: domain Description: PRK1 001 6 Location: 3620636-3621 095 bp Feature: gene Location: 3621188-3622672 bp Ori: AIW77545.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3621590-3622280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3621 590-3622280 bp Feature: gene Location: 3623193-3624356 bp Ori: AIW79490.1 Feature: domain Description: dacD Location: 3623196-3624351 bp Feature: domain Description: dacD Location: 36231 96-3624351 bp Feature: gene Location: 3624537-3625961 bp Ori: AIW77546.1 Gene: sbcB Feature: domain Description: SbcB Location: 3624543-3625959 bp Feature: domain Description: SbcB Location: 3624543-3625959 bp Feature: gene Location: 4231787-4232020 bp Ori: AIW78088.1 Feature: domain Description: DinI Location: 4231832-4232015 bp Feature: domain Description: DinI Location: 4231 832-423201 5 bp Feature: gene Location: 4232032-4232220 bp Feature: gene Location: 4232328-4233812 bp Ori: AIW78090.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4232730-4233420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4232730-4233420 bp Feature: gene Location: 4234293-4236677 bp Ori: AIW78091.1 Feature: domain Description: Phage_GPA Location: 4234857-4235823 bp Feature: domain Description: Phage_GPA Location: 4234857-4235823 bp Feature: gene Location: 4236674-4237525 bp Ori: AIW78092.1 Feature: domain Description: dam Location: 4236677-4237448 bp Feature: domain Description: dam Location: 4236677-4237448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Phage_GPA (pfam05840), dam (TIGR00571)

Seq: CP009777.1 Klebsiella pneumoniae subsp. pneumoniae strain KPNIH32 plasmid pKPN-a68, complete sequence (212192 bp)
Overview 1 RT 1: 97234-102228 bp Neighborhood of RT #1 [97234, 102230] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 97234-98505 bp Ori: AIW79768.1 Feature: domain Description: umuC Location: 97237-98500 bp Feature: domain Description: umuC Location: 972 37-98500 bp Feature: gene Location: 98505-98930 bp Ori: AIW79769.1 Feature: domain Description: PRK10276 Location: 98508-98916 bp Feature: domain Description: PRK102 76 Location: 98508-98916 bp Feature: gene Location: 99336-100820 bp Ori: AIW79770.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99738-100428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99738-10042 8 bp Feature: gene Location: 101054-101284 bp Feature: gene Location: 101805-102230 bp Ori: AIW79772.1 Feature: domain Description: Antirestrict Location: 101940-102228 bp Feature: domain Description: Antirestrict Location: 101940-102 2 2 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)