myRT

myRT report for GCA_000783915.2_ASM78391v2

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Seq: CP026050.1 Serratia marcescens strain FDAARGOS_65 chromosome, complete genome (5248423 bp)
Overview 1 RT 1: 2931555-2936913 bp 2 RT 2: 2943435-2947796 bp Neighborhood of RT #1 [2931555, 2937098] HTH_1 PBP2_DntR_like_1 PRK10819 RVT-Retrons YafY Neighborhood of RT #2 [2943435, 2947804] PRK09678 RVT-Retrons PRK09692 Feature: gene Location: 2931555-2932457 bp Ori: AUU10204.1 Feature: domain Description: HTH_1 Location: 2931579-2931750 bp Feature: domain Description: HTH_1 Location: 2931 579-2931 750 bp Feature: domain Description: PBP2_DntR_like_1 Location: 2931846-2932437 bp Feature: domain Description: PBP2_DntR_like_1 Location: 2931 846-2932437 bp Feature: gene Location: 2932673-2933044 bp Ori: AUU10205.1 Feature: domain Description: PRK10819 Location: 2932754-2932997 bp Feature: domain Description: PRK1 081 9 Location: 2932754-2932997 bp Feature: gene Location: 2933338-2934288 bp Ori: AUU10206.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2933437-2934028 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2933437-2934028 bp Feature: gene Location: 2934275-2935228 bp Feature: gene Location: 2936337-2937098 bp Ori: AUU12339.1 Feature: domain Description: YafY Location: 2936577-2936913 bp Feature: domain Description: YafY Location: 2936577-293691 3 bp Feature: gene Location: 2943435-2943689 bp Ori: AUU10213.1 Feature: domain Description: PRK09678 Location: 2943438-2943627 bp Feature: domain Description: PRK09678 Location: 2943438-2943627 bp Feature: gene Location: 2944229-2945209 bp Feature: gene Location: 2945196-2946122 bp Ori: AUU10215.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2945301-2945883 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2945301 -2945883 bp Feature: gene Location: 2946119-2946601 bp Feature: gene Location: 2946638-2947804 bp Ori: AUU10217.1 Feature: domain Description: PRK09692 Location: 2946647-2947796 bp Feature: domain Description: PRK09692 Location: 2946647-2947796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_DntR_like_1 (cd08460), PRK10819 (transport protein TonB; Provisional), RVT-Retrons, YafY (COG2378), PRK09678 (DNA-binding transcriptional regulator; Provisional), PRK09692 (Integrase; provisional)