myRT

myRT report for GCA_000784875.3_ASM78487v3

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Seq: CP009883.1 Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence (331227 bp)
Overview 1 RT 1: 278737-284198 bp Neighborhood of RT #1 [278737, 284200] DDE_Tnp_IS1 quinone_pig3 RVT-GII GIIM PHA02517 PRK11352 Feature: gene Location: 278737-279240 bp Ori: AIX52624.1 Feature: domain Description: DDE_Tnp_IS1 Location: 278848-279238 bp Feature: domain Description: DDE_Tnp_IS1 Location: 278848-279238 bp Feature: gene Location: 279453-280454 bp Ori: AIX52625.1 Feature: domain Description: quinone_pig3 Location: 279477-280449 bp Feature: domain Description: quinone_pig3 Location: 279477-280449 bp Feature: gene Location: 281136-282644 bp Ori: AIX52694.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281394-282126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281 394-2821 26 bp Feature: domain Description: GIIM Note: maturase Location: 282201-282399 bp Feature: domain Description: GIIM Note: maturase Location: 282201 -282399 bp Feature: gene Location: 283251-283676 bp Ori: AIX52626.1 Feature: domain Description: PHA02517 Location: 283272-283611 bp Feature: domain Description: PHA0251 7 Location: 283272-28361 1 bp Feature: gene Location: 283892-284200 bp Ori: AIX52627.1 Feature: domain Description: PRK11352 Location: 284057-284198 bp Feature: domain Description: PRK1 1 352 Location: 284057-2841 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), quinone_pig3 (TIGR02824), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK11352 (formaldehyde-responsive transcriptional repressor FrmR)